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Aliases for RPL36AP20 Gene

Subcategory (RNA class) for RPL36AP20 Gene

lncRNA

Aliases for RPL36AP20 Gene

  • Ribosomal Protein L36a Pseudogene 20 2 3
  • RPL36A_6_630 3
  • CTC-550M4.1 5

External Ids for RPL36AP20 Gene

ORGUL Members for RPL36AP20 Gene

Previous GeneCards Identifiers for RPL36AP20 Gene

  • GC05U901100
  • GC05M151876

Summaries for RPL36AP20 Gene

GeneCards Summary for RPL36AP20 Gene

RPL36AP20 (Ribosomal Protein L36a Pseudogene 20) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP20 Gene

Genomics for RPL36AP20 Gene

Regulatory Elements for RPL36AP20 Gene

Enhancers for RPL36AP20 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F152527 0.4 Ensembl 0.3 -31.5 -31484 0.6 JUND ETV6 GC05P152555 RPL36AP20
GH05F152528 0.2 ENCODE 0.3 -32.3 -32314 0.2 GC05P152555 RPL36AP20
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL36AP20 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL36AP20 Gene

Chromosome:
5
Start:
152,495,718 bp from pter
End:
152,496,017 bp from pter
Size:
300 bases
Orientation:
Minus strand

Genomic View for RPL36AP20 Gene

Genes around RPL36AP20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP20 Gene

Proteins for RPL36AP20 Gene

Post-translational modifications for RPL36AP20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP20 Gene

Domains & Families for RPL36AP20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP20 Gene

Function for RPL36AP20 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP20 Gene

Localization for RPL36AP20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL36AP20 Gene

Pathways & Interactions for RPL36AP20 Gene

SuperPathways for RPL36AP20 Gene

No Data Available

Interacting Proteins for RPL36AP20 Gene

Gene Ontology (GO) - Biological Process for RPL36AP20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP20 Gene

Transcripts for RPL36AP20 Gene

mRNA/cDNA for RPL36AP20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP20 Gene

No ASD Table

Relevant External Links for RPL36AP20 Gene

GeneLoc Exon Structure for
RPL36AP20
ECgene alternative splicing isoforms for
RPL36AP20

Expression for RPL36AP20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL36AP20 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP20 Gene:

RPL36AP20
genes like me logo Genes that share expression patterns with RPL36AP20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL36AP20 Gene

Orthologs for RPL36AP20 Gene

Evolution for RPL36AP20 Gene

ENSEMBL:
Gene Tree for RPL36AP20 (if available)
TreeFam:
Gene Tree for RPL36AP20 (if available)

No data available for Orthologs for RPL36AP20 Gene

Paralogs for RPL36AP20 Gene

No data available for Paralogs for RPL36AP20 Gene

Variants for RPL36AP20 Gene

Relevant External Links for RPL36AP20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP20 Gene

Disorders for RPL36AP20 Gene

No disorders were found for RPL36AP20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP20 Gene

Publications for RPL36AP20 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL36AP20 Gene

Sources for RPL36AP20 Gene

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