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Aliases for RPL36AP18 Gene

Aliases for RPL36AP18 Gene

  • Ribosomal Protein L36a Pseudogene 18 2 3
  • RP11-356M17.1 5
  • RPL36A_5_491 3

External Ids for RPL36AP18 Gene

Previous GeneCards Identifiers for RPL36AP18 Gene

  • GC04U901001
  • GC04P077324
  • GC04P077327
  • GC04P077329
  • GC04P077333

Summaries for RPL36AP18 Gene

GeneCards Summary for RPL36AP18 Gene

RPL36AP18 (Ribosomal Protein L36a Pseudogene 18) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP18 Gene

Genomics for RPL36AP18 Gene

Regulatory Elements for RPL36AP18 Gene

Enhancers for RPL36AP18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F076377 0.5 Ensembl ENCODE 12.2 -23.3 -23329 1.0 PKNOX1 ZNF133 FEZF1 THRB RAD21 RFX5 GATA2 ZNF366 MIXL1 ZNF654 CCDC158 RPL36AP18 ENSG00000199857 RNU6-1000P STBD1 FAM47E SCARB2 SHROOM3 GC04M076357
GH04F076373 0.8 Ensembl 11.4 -27.0 -26959 0.7 HLF JUN CEBPB ENSG00000199857 RPL36AP18 FAM47E SCARB2 SHROOM3 GC04M076357 RNU6-1000P
GH04F076447 0.5 ENCODE 10.9 +46.3 46259 0.2 CCDC158 ENSG00000199857 RPL36AP18 RNU6-1000P RNU6-145P SHROOM3 ENSG00000249278
GH04F076448 0.8 ENCODE 10.9 +48.3 48346 1.3 ATF3 CEBPA CEBPB MNT YY1 CCDC158 ENSG00000199857 RPL36AP18 RNU6-1000P RNU6-145P STBD1 SHROOM3 ENSG00000249278
GH04F076449 0.7 ENCODE 10.9 +46.6 46576 0.3 CCDC158 ENSG00000199857 RPL36AP18 RNU6-1000P RNU6-145P SHROOM3 ENSG00000249278
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL36AP18 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL36AP18 Gene

Chromosome:
4
Start:
76,401,224 bp from pter
End:
76,401,619 bp from pter
Size:
396 bases
Orientation:
Plus strand

Genomic View for RPL36AP18 Gene

Genes around RPL36AP18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP18 Gene

Proteins for RPL36AP18 Gene

Post-translational modifications for RPL36AP18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP18 Gene

Domains & Families for RPL36AP18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP18 Gene

Function for RPL36AP18 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP18 Gene

Localization for RPL36AP18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL36AP18 Gene

Pathways & Interactions for RPL36AP18 Gene

SuperPathways for RPL36AP18 Gene

No Data Available

Interacting Proteins for RPL36AP18 Gene

Gene Ontology (GO) - Biological Process for RPL36AP18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP18 Gene

Transcripts for RPL36AP18 Gene

mRNA/cDNA for RPL36AP18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP18 Gene

No ASD Table

Relevant External Links for RPL36AP18 Gene

GeneLoc Exon Structure for
RPL36AP18
ECgene alternative splicing isoforms for
RPL36AP18

Expression for RPL36AP18 Gene

mRNA expression in normal human tissues for RPL36AP18 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP18 Gene:

RPL36AP18
genes like me logo Genes that share expression patterns with RPL36AP18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL36AP18 Gene

Orthologs for RPL36AP18 Gene

Evolution for RPL36AP18 Gene

ENSEMBL:
Gene Tree for RPL36AP18 (if available)
TreeFam:
Gene Tree for RPL36AP18 (if available)

No data available for Orthologs for RPL36AP18 Gene

Paralogs for RPL36AP18 Gene

No data available for Paralogs for RPL36AP18 Gene

Variants for RPL36AP18 Gene

Relevant External Links for RPL36AP18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP18 Gene

Disorders for RPL36AP18 Gene

No disorders were found for RPL36AP18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP18 Gene

Publications for RPL36AP18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL36AP18 Gene

Sources for RPL36AP18 Gene

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