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Aliases for RPL36AP15 Gene

Aliases for RPL36AP15 Gene

  • Ribosomal Protein L36a Pseudogene 15 2 3 5
  • RPL36A_4_216 3

External Ids for RPL36AP15 Gene

Previous GeneCards Identifiers for RPL36AP15 Gene

  • GC02U901660
  • GC02M048025
  • GC02M047761

Summaries for RPL36AP15 Gene

GeneCards Summary for RPL36AP15 Gene

RPL36AP15 (Ribosomal Protein L36a Pseudogene 15) is a Pseudogene.

Additional gene information for RPL36AP15 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP15 Gene

Genomics for RPL36AP15 Gene

GeneHancer (GH) Regulatory Elements for RPL36AP15 Gene

Promoters and enhancers for RPL36AP15 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I047798 Enhancer 0.5 Ensembl 550.8 -0.9 -878 1.1 SMAD5 POLR2A ZFP64 SUPT5H GC02M047798 RPL36AP15 MSH6 GC02M047830 FBXO11
GH02I048439 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 10.5 -642.7 -642673 2.2 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 YY1 POLR2B ZNF766 E2F8 PPP1R21 ENSG00000272663 GC02M048441 MSH6 RPL36AP15 RNU6-282P GTF2A1L GC02M048449 PIR50991 GC02P048370
GH02I047268 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.1 +525.9 525935 6.7 HDGF FOXA2 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZNF213 ZNF207 ZNF143 MSH6 ENSG00000228925 FBXO11 ENSG00000233845 ENSG00000225187 SOCS5 MSH2 CALM2 RPL36AP15 RPL18AP6
GH02I048342 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 11.1 -546.7 -546734 4.4 FOXA2 ARID4B SIN3A FEZF1 DMAP1 ETS1 YY1 SLC30A9 ATF7 FOS FOXN2 PPP1R21 MSH6 RPL36AP15 GTF2A1L GC02M048341 RNU4-49P GC02M048365
GH02I046825 Enhancer 0.8 ENCODE dbSUPER 10.8 +969.2 969239 7.6 MCM3 ZSCAN4 CEBPB MNT ATF2 ZBTB40 MITF ZFHX2 MAFF NONO MSH6 ENSG00000225187 ENSG00000228925 ENSG00000226548 RPL18AP6 RPL36AP15 SOCS5 LOC100506142 LINC01119
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL36AP15 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL36AP15 Gene

Genomic Locations for RPL36AP15 Gene
chr2:47,797,754-47,798,140
(GRCh38/hg38)
Size:
387 bases
Orientation:
Minus strand
chr2:48,024,893-48,025,279
(GRCh37/hg19)

Genomic View for RPL36AP15 Gene

Genes around RPL36AP15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP15 Gene

Proteins for RPL36AP15 Gene

Post-translational modifications for RPL36AP15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP15 Gene

Domains & Families for RPL36AP15 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP15 Gene

Function for RPL36AP15 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP15 Gene

Localization for RPL36AP15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP15 Gene

Pathways & Interactions for RPL36AP15 Gene

SuperPathways for RPL36AP15 Gene

No Data Available

Interacting Proteins for RPL36AP15 Gene

Gene Ontology (GO) - Biological Process for RPL36AP15 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP15 Gene

Drugs & Compounds for RPL36AP15 Gene

No Compound Related Data Available

Transcripts for RPL36AP15 Gene

mRNA/cDNA for RPL36AP15 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP15 Gene

No ASD Table

Relevant External Links for RPL36AP15 Gene

GeneLoc Exon Structure for
RPL36AP15
ECgene alternative splicing isoforms for
RPL36AP15

Expression for RPL36AP15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL36AP15 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP15 Gene:

RPL36AP15
genes like me logo Genes that share expression patterns with RPL36AP15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP15 Gene

Orthologs for RPL36AP15 Gene

Evolution for RPL36AP15 Gene

ENSEMBL:
Gene Tree for RPL36AP15 (if available)
TreeFam:
Gene Tree for RPL36AP15 (if available)

No data available for Orthologs for RPL36AP15 Gene

Paralogs for RPL36AP15 Gene

No data available for Paralogs for RPL36AP15 Gene

Variants for RPL36AP15 Gene

Additional Variant Information for RPL36AP15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP15 Gene

Disorders for RPL36AP15 Gene

No disorders were found for RPL36AP15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP15 Gene

Publications for RPL36AP15 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL36AP15 Gene

Sources for RPL36AP15 Gene

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