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Aliases for RPL36A-HNRNPH2 Gene

Aliases for RPL36A-HNRNPH2 Gene

  • RPL36A-HNRNPH2 Readthrough 2 3

External Ids for RPL36A-HNRNPH2 Gene

Previous GeneCards Identifiers for RPL36A-HNRNPH2 Gene

  • GC0XU901730
  • GC0XP100647

Summaries for RPL36A-HNRNPH2 Gene

Entrez Gene Summary for RPL36A-HNRNPH2 Gene

  • This locus represents naturally occurring read-through transcription between the neighboring ribosomal protein L36a and heterogeneous nuclear ribonucleoprotein H2 (H') genes on chromosome X. The read-through transcript produces a protein with similarity to the protein encoded by the upstream locus, ribosomal protein L36a. Alternatively spliced transcript variants have been identified. [provided by RefSeq, Jan 2011]

GeneCards Summary for RPL36A-HNRNPH2 Gene

RPL36A-HNRNPH2 (RPL36A-HNRNPH2 Readthrough) is a Protein Coding gene. Among its related pathways are mRNA Splicing - Major Pathway and CFTR translational fidelity (class I mutations). An important paralog of this gene is RPL36A.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36A-HNRNPH2 Gene

Genomics for RPL36A-HNRNPH2 Gene

Genomic Location for RPL36A-HNRNPH2 Gene

Start:
101,390,890 bp from pter
End:
101,414,140 bp from pter
Size:
23,251 bases
Orientation:
Plus strand

Genomic View for RPL36A-HNRNPH2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RPL36A-HNRNPH2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36A-HNRNPH2 Gene

No data available for Regulatory Elements for RPL36A-HNRNPH2 Gene

Proteins for RPL36A-HNRNPH2 Gene

  • Protein details for RPL36A-HNRNPH2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    H0Y3V9
    Recommended name:
    Protein RPL36A-HNRNPH2
    Protein Accession:
    H0Y3V9
    Secondary Accessions:

    Protein attributes for RPL36A-HNRNPH2 Gene

    Size:
    77 amino acids
    Molecular mass:
    8996 Da
    Quaternary structure:
    No Data Available
  • Protein details for RPL36A-HNRNPH2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    H7BZ11
    Recommended name:
    Protein RPL36A-HNRNPH2
    Protein Accession:
    H7BZ11
    Secondary Accessions:

    Protein attributes for RPL36A-HNRNPH2 Gene

    Size:
    118 amino acids
    Molecular mass:
    13792 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RPL36A-HNRNPH2 Gene

Proteomics data for RPL36A-HNRNPH2 Gene at MOPED

Post-translational modifications for RPL36A-HNRNPH2 Gene

No Post-translational modifications

Other Protein References for RPL36A-HNRNPH2 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for RPL36A-HNRNPH2 Gene

Domains for RPL36A-HNRNPH2 Gene

Protein Domains for RPL36A-HNRNPH2 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RPL36A-HNRNPH2: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36A-HNRNPH2 Gene

Function for RPL36A-HNRNPH2 Gene

Gene Ontology (GO) - Molecular Function for RPL36A-HNRNPH2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003735 structural constituent of ribosome --
genes like me logo Genes that share ontologies with RPL36A-HNRNPH2: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RPL36A-HNRNPH2 Gene

Localization for RPL36A-HNRNPH2 Gene

Gene Ontology (GO) - Cellular Components for RPL36A-HNRNPH2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005840 ribosome --
genes like me logo Genes that share ontologies with RPL36A-HNRNPH2: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for RPL36A-HNRNPH2 Gene

Pathways for RPL36A-HNRNPH2 Gene

genes like me logo Genes that share pathways with RPL36A-HNRNPH2: view

Pathways by source for RPL36A-HNRNPH2 Gene

2 BioSystems pathways for RPL36A-HNRNPH2 Gene
1 KEGG pathway for RPL36A-HNRNPH2 Gene

Interacting Proteins for RPL36A-HNRNPH2 Gene

Gene Ontology (GO) - Biological Process for RPL36A-HNRNPH2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006412 translation --
genes like me logo Genes that share ontologies with RPL36A-HNRNPH2: view

Transcripts for RPL36A-HNRNPH2 Gene

mRNA/cDNA for RPL36A-HNRNPH2 Gene

(2) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36A-HNRNPH2 Gene

No ASD Table

Relevant External Links for RPL36A-HNRNPH2 Gene

GeneLoc Exon Structure for
RPL36A-HNRNPH2
ECgene alternative splicing isoforms for
RPL36A-HNRNPH2

Expression for RPL36A-HNRNPH2 Gene

mRNA expression in normal human tissues for RPL36A-HNRNPH2 Gene

genes like me logo Genes that share expressions with RPL36A-HNRNPH2: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for RPL36A-HNRNPH2 Gene

Orthologs for RPL36A-HNRNPH2 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for RPL36A-HNRNPH2 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia -- 36
  • 92 (a)
OneToMany
RPL36A 36
  • 95 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 36
  • 95 (a)
ManyToMany
LOC102157323 35
  • 91 (n)
  • 93 (a)
mouse
(Mus musculus)
Mammalia Rpl36al 36
  • 95 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia RPL36A-HNRNPH2 36
  • 95 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 92 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia LOC100910714 35
  • 85.63 (n)
  • 89.91 (a)
chicken
(Gallus gallus)
Aves -- 36
  • 86 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 92 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii rpl36a 36
  • 93 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta RpL36A 36
  • 73 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea rpl-41 36
  • 74 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes RPL42A 36
  • 71 (a)
ManyToMany
RPL42B 36
  • 71 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.6059 36
  • 75 (a)
OneToMany
Species with no ortholog for RPL36A-HNRNPH2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for RPL36A-HNRNPH2 Gene

ENSEMBL:
Gene Tree for RPL36A-HNRNPH2 (if available)
TreeFam:
Gene Tree for RPL36A-HNRNPH2 (if available)

Paralogs for RPL36A-HNRNPH2 Gene

Paralogs for RPL36A-HNRNPH2 Gene

Selected SIMAP similar genes for RPL36A-HNRNPH2 Gene using alignment to 2 proteins:

Pseudogenes.org Pseudogenes for RPL36A-HNRNPH2 Gene

genes like me logo Genes that share paralogs with RPL36A-HNRNPH2: view

Variants for RPL36A-HNRNPH2 Gene

Sequence variations from dbSNP and Humsavar for RPL36A-HNRNPH2 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs2515901 -- 101,397,098(-) AACCC(A/G)TATTT intron-variant
rs5991931 -- 101,397,078(+) GGGTG(A/G)GTATC intron-variant
rs5991932 -- 101,397,224(+) cttgg(C/G)tcact intron-variant
rs7051126 -- 101,396,922(+) cccga(C/T)ttggc intron-variant
rs113806371 -- 101,397,237(+) ACCCC(C/T)CCACT intron-variant

Relevant External Links for RPL36A-HNRNPH2 Gene

HapMap Linkage Disequilibrium report
RPL36A-HNRNPH2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for RPL36A-HNRNPH2 Gene

Disorders for RPL36A-HNRNPH2 Gene

No disorders were found for RPL36A-HNRNPH2 Gene.

No data available for UniProtKB/Swiss-Prot for RPL36A-HNRNPH2 Gene

Publications for RPL36A-HNRNPH2 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  2. Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PMID: 20967262) Prakash T. … Taylor T.D. (PLoS ONE 2010) 3
  3. Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass. (PMID: 23000965) Povlsen L.K. … Choudhary C. (Nat. Cell Biol. 2012) 3

Products for RPL36A-HNRNPH2 Gene

Sources for RPL36A-HNRNPH2 Gene

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