Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL35AP3 Gene

Subcategory (RNA class) for RPL35AP3 Gene

lncRNA

Aliases for RPL35AP3 Gene

  • Ribosomal Protein L35a Pseudogene 3 2 3 5
  • RPL35A_7_760 3
  • BA55K22.4 3

External Ids for RPL35AP3 Gene

ORGUL Members for RPL35AP3 Gene

Previous GeneCards Identifiers for RPL35AP3 Gene

  • GC00U914182
  • GC06U900634
  • GC06M137296
  • GC06M134859

Summaries for RPL35AP3 Gene

GeneCards Summary for RPL35AP3 Gene

RPL35AP3 (Ribosomal Protein L35a Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL35AP3 Gene

Genomics for RPL35AP3 Gene

Regulatory Elements for RPL35AP3 Gene

Enhancers for RPL35AP3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F136968 0.7 ENCODE 0.8 +4.5 4543 1.8 JUN MAX CEBPG RAD21 RFX5 ZNF664 GATA3 ZFHX2 NFYB RCOR1 NHEG1 ENSG00000235399 IL20RA RPL35AP3 ENSG00000207247
GH06F136964 0.5 ENCODE 0.4 +9.6 9580 1.3 NHEG1 ENSG00000235399 OLIG3 RPL35AP3 ENSG00000207247
GH06F136969 0.6 ENCODE 0.4 +5.9 5932 0.2 CTCF WRNIP1 ETV1 ZNF2 RAD21 ZKSCAN1 RFXANK ZNF366 SMC3 MIXL1 NHEG1 ENSG00000235399 RPL35AP3 ENSG00000207247
GH06F136962 0.8 ENCODE 0.4 +11.5 11458 0.4 PKNOX1 ZBED1 CBFB JUNB FEZF1 SMARCA4 POLR2A FOXP2 ETV6 CREM RPL35AP3 ENSG00000207247
GH06F136959 0.4 ENCODE 0.4 +14.5 14453 1.8 HDAC1 RFX1 L3MBTL2 NR2F1 TAL1 ARID1B NCOR1 KDM1A MGA RPL35AP3 ENSG00000207247
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL35AP3 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL35AP3 Gene

Chromosome:
6
Start:
136,973,930 bp from pter
End:
136,974,259 bp from pter
Size:
330 bases
Orientation:
Minus strand

Genomic View for RPL35AP3 Gene

Genes around RPL35AP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL35AP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL35AP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL35AP3 Gene

Proteins for RPL35AP3 Gene

Post-translational modifications for RPL35AP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL35AP3 Gene

Domains & Families for RPL35AP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL35AP3 Gene

Function for RPL35AP3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL35AP3 Gene

Localization for RPL35AP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL35AP3 Gene

Pathways & Interactions for RPL35AP3 Gene

SuperPathways for RPL35AP3 Gene

No Data Available

Interacting Proteins for RPL35AP3 Gene

Gene Ontology (GO) - Biological Process for RPL35AP3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL35AP3 Gene

Transcripts for RPL35AP3 Gene

mRNA/cDNA for RPL35AP3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL35AP3 Gene

No ASD Table

Relevant External Links for RPL35AP3 Gene

GeneLoc Exon Structure for
RPL35AP3
ECgene alternative splicing isoforms for
RPL35AP3

Expression for RPL35AP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL35AP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL35AP3 Gene:

RPL35AP3
genes like me logo Genes that share expression patterns with RPL35AP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL35AP3 Gene

Orthologs for RPL35AP3 Gene

Evolution for RPL35AP3 Gene

ENSEMBL:
Gene Tree for RPL35AP3 (if available)
TreeFam:
Gene Tree for RPL35AP3 (if available)

No data available for Orthologs for RPL35AP3 Gene

Paralogs for RPL35AP3 Gene

No data available for Paralogs for RPL35AP3 Gene

Variants for RPL35AP3 Gene

Relevant External Links for RPL35AP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL35AP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL35AP3 Gene

Disorders for RPL35AP3 Gene

Relevant External Links for RPL35AP3

Genetic Association Database (GAD)
RPL35AP3

No disorders were found for RPL35AP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL35AP3 Gene

Publications for RPL35AP3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin E.J. … Vasan R.S. (BMC Med. Genet. 2007) 46 64

Products for RPL35AP3 Gene

Sources for RPL35AP3 Gene

Content
Loading form....