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Aliases for RPL35AP28 Gene

Aliases for RPL35AP28 Gene

  • Ribosomal Protein L35a Pseudogene 28 2 3
  • RPL35A_15_1235 3
  • RP11-70F11.2 5

External Ids for RPL35AP28 Gene

Previous GeneCards Identifiers for RPL35AP28 Gene

  • GC12U901054
  • GC12P050257
  • GC12P050258

Summaries for RPL35AP28 Gene

GeneCards Summary for RPL35AP28 Gene

RPL35AP28 (Ribosomal Protein L35a Pseudogene 28) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL35AP28 Gene

Genomics for RPL35AP28 Gene

Regulatory Elements for RPL35AP28 Gene

Enhancers for RPL35AP28 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F049966 0.8 ENCODE 16.3 +104.0 103982 1.2 ATF1 ARID4B SIN3A ZNF48 ZNF2 SLC30A9 GTF3C2 GLIS2 ZNF143 KLF7 RPL35AP28 BCDIN3D ATF1 ENSG00000257253 FAM186A LOC283332 AQP6 CERS5 LOC101927318
GH12F049661 1.4 FANTOM5 Ensembl ENCODE 16.2 -199.4 -199380 5.0 HDGF PKNOX1 CREB3L1 ARID4B SIN3A ZNF2 ZNF302 ZNF143 ZNF416 ZNF207 DDX23 LOC390314 KANSL2 LIMA1 CCNT1 PRPF40B ENSG00000257298 FMNL3 LOC101927267 RPL35AP28
GH12F050056 0.7 ENCODE 16.2 +194.4 194365 1.1 ZNF493 ZNF133 ARID4B SIN3A GLI4 ZNF2 GLIS2 ZNF302 ZNF416 ZNF207 LIMA1 ATF1 ENSG00000257298 CERS5 LOC101927267 RPL35AP28 PRPF40B ENSG00000257253 BCDIN3D FAM186A
GH12F050399 0.5 ENCODE 16.2 +538.8 538777 4.0 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 LIMA1 PRPF40B ENSG00000257298 CSRNP2 ATF1 TFCP2 CERS5 LOC100422296 RPL35AP28 ENSG00000257964
GH12F049321 0.5 ENCODE 16.2 -540.0 -540047 2.4 HDGF PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 C1QL4 RPL35AP28 LALBA OR5BS1P OR11M1P ENSG00000258273 H1FNT ENSG00000257253 LOC283332 DNAJC22
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL35AP28 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL35AP28 Gene

Chromosome:
12
Start:
49,863,106 bp from pter
End:
49,863,541 bp from pter
Size:
436 bases
Orientation:
Plus strand

Genomic View for RPL35AP28 Gene

Genes around RPL35AP28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL35AP28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL35AP28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL35AP28 Gene

Proteins for RPL35AP28 Gene

Post-translational modifications for RPL35AP28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL35AP28 Gene

Domains & Families for RPL35AP28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL35AP28 Gene

Function for RPL35AP28 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL35AP28 Gene

Localization for RPL35AP28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL35AP28 Gene

Pathways & Interactions for RPL35AP28 Gene

SuperPathways for RPL35AP28 Gene

No Data Available

Interacting Proteins for RPL35AP28 Gene

Gene Ontology (GO) - Biological Process for RPL35AP28 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL35AP28 Gene

Transcripts for RPL35AP28 Gene

mRNA/cDNA for RPL35AP28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL35AP28 Gene

No ASD Table

Relevant External Links for RPL35AP28 Gene

GeneLoc Exon Structure for
RPL35AP28
ECgene alternative splicing isoforms for
RPL35AP28

Expression for RPL35AP28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL35AP28 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL35AP28 Gene:

RPL35AP28
genes like me logo Genes that share expression patterns with RPL35AP28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL35AP28 Gene

Orthologs for RPL35AP28 Gene

Evolution for RPL35AP28 Gene

ENSEMBL:
Gene Tree for RPL35AP28 (if available)
TreeFam:
Gene Tree for RPL35AP28 (if available)

No data available for Orthologs for RPL35AP28 Gene

Paralogs for RPL35AP28 Gene

No data available for Paralogs for RPL35AP28 Gene

Variants for RPL35AP28 Gene

Relevant External Links for RPL35AP28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL35AP28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL35AP28 Gene

Disorders for RPL35AP28 Gene

No disorders were found for RPL35AP28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL35AP28 Gene

Publications for RPL35AP28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL35AP28 Gene

Sources for RPL35AP28 Gene

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