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Aliases for RPL35AP28 Gene

Aliases for RPL35AP28 Gene

  • Ribosomal Protein L35a Pseudogene 28 2 3 5
  • RPL35A_15_1235 3

External Ids for RPL35AP28 Gene

Previous GeneCards Identifiers for RPL35AP28 Gene

  • GC12U901054
  • GC12P050257
  • GC12P050258

Summaries for RPL35AP28 Gene

GeneCards Summary for RPL35AP28 Gene

RPL35AP28 (Ribosomal Protein L35a Pseudogene 28) is a Pseudogene.

Additional gene information for RPL35AP28 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL35AP28 Gene

Genomics for RPL35AP28 Gene

GeneHancer (GH) Regulatory Elements for RPL35AP28 Gene

Promoters and enhancers for RPL35AP28 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I049863 Enhancer 0.5 ENCODE dbSUPER 550.8 +1.3 1338 1 ZSCAN4 RPL35AP28 NCKAP5L AQP5 AQP6 AQP2 ENSG00000257253 GC12M049898
GH12I049823 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 4.6 -36.6 -36588 6.3 HDGF PKNOX1 CLOCK ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B E2F8 NCKAP5L SMARCD1 LMBR1L FAIM2 ASIC1 DDX23 BCDIN3D-AS1 CERS5 KMT2D TUBA1A
GH12I049867 Enhancer 1.5 Ensembl ENCODE dbSUPER 0.4 +5.7 5706 3.2 PKNOX1 SMAD1 ARNT SIN3A FEZF1 ZNF2 ZNF766 ZNF213 ZNF302 E2F8 LOC100422296 PRPF40B KMT2D ATF1 ENSG00000257964 SMARCD1 BCDIN3D LMBR1L NCKAP5L LIMA1
GH12I049876 Enhancer 0.8 dbSUPER 0.4 +17.3 17271 7.5 HDAC1 CLOCK ARNT ZSCAN4 YBX1 ZNF121 ZNF207 EGR2 ZNF114 ZNF662 ENSG00000257298 ENSG00000257964 LIMA1 LOC100422296 PRPF40B PRPH BCDIN3D LMBR1L AQP2 TUBA1A
GH12I049894 Enhancer 1 ENCODE dbSUPER 0.3 +31.9 31863 1.9 PKNOX1 GLIS2 FOS RCOR1 EGR2 ELF1 TSHZ1 SMARCB1 ZNF148 NFIC FAIM2 GC12M049898 RPL35AP28
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL35AP28 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL35AP28 Gene

Genomic Locations for RPL35AP28 Gene
chr12:49,863,106-49,863,541
(GRCh38/hg38)
Size:
436 bases
Orientation:
Plus strand
chr12:50,256,889-50,257,324
(GRCh37/hg19)

Genomic View for RPL35AP28 Gene

Genes around RPL35AP28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL35AP28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL35AP28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL35AP28 Gene

Proteins for RPL35AP28 Gene

Post-translational modifications for RPL35AP28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL35AP28 Gene

Domains & Families for RPL35AP28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL35AP28 Gene

Function for RPL35AP28 Gene

Phenotypes From GWAS Catalog for RPL35AP28 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL35AP28 Gene

Localization for RPL35AP28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL35AP28 Gene

Pathways & Interactions for RPL35AP28 Gene

SuperPathways for RPL35AP28 Gene

No Data Available

Interacting Proteins for RPL35AP28 Gene

Gene Ontology (GO) - Biological Process for RPL35AP28 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL35AP28 Gene

Drugs & Compounds for RPL35AP28 Gene

No Compound Related Data Available

Transcripts for RPL35AP28 Gene

mRNA/cDNA for RPL35AP28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL35AP28 Gene

No ASD Table

Relevant External Links for RPL35AP28 Gene

GeneLoc Exon Structure for
RPL35AP28
ECgene alternative splicing isoforms for
RPL35AP28

Expression for RPL35AP28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL35AP28 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL35AP28 Gene:

RPL35AP28
genes like me logo Genes that share expression patterns with RPL35AP28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL35AP28 Gene

Orthologs for RPL35AP28 Gene

Evolution for RPL35AP28 Gene

ENSEMBL:
Gene Tree for RPL35AP28 (if available)
TreeFam:
Gene Tree for RPL35AP28 (if available)

No data available for Orthologs for RPL35AP28 Gene

Paralogs for RPL35AP28 Gene

No data available for Paralogs for RPL35AP28 Gene

Variants for RPL35AP28 Gene

Additional Variant Information for RPL35AP28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL35AP28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL35AP28 Gene

Disorders for RPL35AP28 Gene

No disorders were found for RPL35AP28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL35AP28 Gene

Publications for RPL35AP28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL35AP28 Gene

Sources for RPL35AP28 Gene

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