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Aliases for RPL35AP28 Gene

Aliases for RPL35AP28 Gene

  • Ribosomal Protein L35a Pseudogene 28 2 3 5
  • RPL35A_15_1235 3

External Ids for RPL35AP28 Gene

Previous GeneCards Identifiers for RPL35AP28 Gene

  • GC12U901054
  • GC12P050257
  • GC12P050258

Summaries for RPL35AP28 Gene

GeneCards Summary for RPL35AP28 Gene

RPL35AP28 (Ribosomal Protein L35a Pseudogene 28) is a Pseudogene.

Additional gene information for RPL35AP28 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL35AP28 Gene

Genomics for RPL35AP28 Gene

Regulatory Elements for RPL35AP28 Gene

Enhancers for RPL35AP28 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H049344 1.7 FANTOM5 Ensembl ENCODE 14.6 -516.3 -516282 4.4 HDGF FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF143 CCNT1 KANSL2 DDX23 LOC390314 KMT2D LIMA1 RPL35AP28 OR11M1P OR5BS1P LALBA
GH12H049055 1.7 FANTOM5 ENCODE dbSUPER 14.6 -804.6 -804604 6.7 FEZF1 DMAP1 YY1 ZNF416 ZNF143 ZNF548 SP3 NFYC ZFP41 MEF2D DDX23 LOC390314 LMBR1L CCNT1 KANSL2 KMT2D SENP1 LOC100422296 PRPF40B OR5BK1P
GH12H049966 1.3 ENCODE dbSUPER 14.7 +104.0 103982 1.2 ATF1 ARID4B SIN3A ZNF2 ZBTB7B SLC30A9 GTF3C2 GLIS2 ZNF143 KLF7 KMT2D RPL35AP28 BCDIN3D SMARCD1 ATF1 LMBR1L ENSG00000257253 FAM186A AQP6 CERS5
GH12H050056 1.3 ENCODE dbSUPER 14.6 +194.4 194365 1.1 ZNF493 ZNF133 ARID4B SIN3A GLI4 ZNF2 GLIS2 ZNF302 ZNF416 ZNF207 KMT2D SMARCD1 LMBR1L LIMA1 ATF1 BCDIN3D LOC101927267 LOC100422296 PRPF40B CERS5
GH12H049296 1.3 Ensembl ENCODE 14.6 -566.0 -565968 2.2 PKNOX1 ATF1 GLI4 ZNF2 ZNF121 GLIS2 ZNF302 ZNF143 KLF7 ZNF548 LIMA1 LOC100422296 BCDIN3D ENSG00000257298 OR5BK1P CCNT1 DDX23 KANSL2 RPL35AP28 OR11M1P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL35AP28 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL35AP28 Gene

Genomic Locations for RPL35AP28 Gene
chr12:49,863,106-49,863,541
(GRCh38/hg38)
Size:
436 bases
Orientation:
Plus strand
chr12:50,256,889-50,257,324
(GRCh37/hg19)

Genomic View for RPL35AP28 Gene

Genes around RPL35AP28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL35AP28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL35AP28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL35AP28 Gene

Proteins for RPL35AP28 Gene

Post-translational modifications for RPL35AP28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL35AP28 Gene

Domains & Families for RPL35AP28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL35AP28 Gene

Function for RPL35AP28 Gene

Phenotypes From GWAS Catalog for RPL35AP28 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL35AP28 Gene

Localization for RPL35AP28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL35AP28 Gene

Pathways & Interactions for RPL35AP28 Gene

SuperPathways for RPL35AP28 Gene

No Data Available

Interacting Proteins for RPL35AP28 Gene

Gene Ontology (GO) - Biological Process for RPL35AP28 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL35AP28 Gene

Drugs & Compounds for RPL35AP28 Gene

No Compound Related Data Available

Transcripts for RPL35AP28 Gene

mRNA/cDNA for RPL35AP28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL35AP28 Gene

No ASD Table

Relevant External Links for RPL35AP28 Gene

GeneLoc Exon Structure for
RPL35AP28
ECgene alternative splicing isoforms for
RPL35AP28

Expression for RPL35AP28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL35AP28 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL35AP28 Gene:

RPL35AP28
genes like me logo Genes that share expression patterns with RPL35AP28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL35AP28 Gene

Orthologs for RPL35AP28 Gene

Evolution for RPL35AP28 Gene

ENSEMBL:
Gene Tree for RPL35AP28 (if available)
TreeFam:
Gene Tree for RPL35AP28 (if available)

No data available for Orthologs for RPL35AP28 Gene

Paralogs for RPL35AP28 Gene

No data available for Paralogs for RPL35AP28 Gene

Variants for RPL35AP28 Gene

Relevant External Links for RPL35AP28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL35AP28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL35AP28 Gene

Disorders for RPL35AP28 Gene

No disorders were found for RPL35AP28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL35AP28 Gene

Publications for RPL35AP28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPL35AP28 Gene

Sources for RPL35AP28 Gene

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