Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL35AP Gene

Aliases for RPL35AP Gene

  • Ribosomal Protein L35a Pseudogene 2 3 5
  • RPL35A_15_1710 3
  • BA456N23.1 3

External Ids for RPL35AP Gene

Previous GeneCards Identifiers for RPL35AP Gene

  • GC20U990127
  • GC20M046745
  • GC20M046792
  • GC20M045540
  • GC20M046107
  • GC20M042848

Summaries for RPL35AP Gene

GeneCards Summary for RPL35AP Gene

RPL35AP (Ribosomal Protein L35a Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL35AP Gene

Genomics for RPL35AP Gene

Regulatory Elements for RPL35AP Gene

Enhancers for RPL35AP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20F047500 0.2 ENCODE 12.2 -23.5 -23539 4.6 HDGF CREB3L1 MLX WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 NCOA3 SLC2A10 TP53RK ENSG00000234967 ENSG00000228503 LINC01523 GAPDHP54 LOC100419565 RPL35AP GC20M047582
GH20F047505 0.5 ENCODE 12.2 -27.6 -27571 2.7 HDGF KLF17 SCRT2 ETV6 ZEB2 ZNF610 SMARCA4 ZSCAN16 ZNF580 HMBOX1 NCOA3 RNU6-497P RPL35AP GC20M047582
GH20F047507 0.7 ENCODE 12.2 -29.7 -29715 1.5 HDGF PKNOX1 ZNF133 CHD1 KLF17 ZIC2 ETV6 MLLT1 PRDM1 NCOA3 RNU6-497P RPL35AP GC20M047582
GH20F047535 1 ENCODE 12 -56.2 -56242 0.2 SCRT1 CTCF PKNOX1 RAD21 OSR2 CBX1 HDAC2 SCRT2 ZNF600 ETV6 RNU6-497P RPL35AP NCOA3 GC20M047582
GH20F047522 0.6 ENCODE 11.8 -43.7 -43678 0.4 ZBTB33 E2F4 ETV6 SPI1 NR2C2 RNU6-497P RPL35AP NCOA3 GC20M047582
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL35AP on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL35AP Gene

Chromosome:
20
Start:
47,478,214 bp from pter
End:
47,479,010 bp from pter
Size:
797 bases
Orientation:
Minus strand

Genomic View for RPL35AP Gene

Genes around RPL35AP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL35AP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL35AP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL35AP Gene

Proteins for RPL35AP Gene

Post-translational modifications for RPL35AP Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL35AP Gene

Domains & Families for RPL35AP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL35AP Gene

Function for RPL35AP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL35AP Gene

Localization for RPL35AP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL35AP Gene

Pathways & Interactions for RPL35AP Gene

SuperPathways for RPL35AP Gene

No Data Available

Interacting Proteins for RPL35AP Gene

Gene Ontology (GO) - Biological Process for RPL35AP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL35AP Gene

Transcripts for RPL35AP Gene

mRNA/cDNA for RPL35AP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL35AP Gene

No ASD Table

Relevant External Links for RPL35AP Gene

GeneLoc Exon Structure for
RPL35AP
ECgene alternative splicing isoforms for
RPL35AP

Expression for RPL35AP Gene

mRNA expression in normal human tissues for RPL35AP Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL35AP Gene:

RPL35AP
genes like me logo Genes that share expression patterns with RPL35AP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL35AP Gene

Orthologs for RPL35AP Gene

Evolution for RPL35AP Gene

ENSEMBL:
Gene Tree for RPL35AP (if available)
TreeFam:
Gene Tree for RPL35AP (if available)

No data available for Orthologs for RPL35AP Gene

Paralogs for RPL35AP Gene

No data available for Paralogs for RPL35AP Gene

Variants for RPL35AP Gene

Relevant External Links for RPL35AP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL35AP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL35AP Gene

Disorders for RPL35AP Gene

No disorders were found for RPL35AP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL35AP Gene

Publications for RPL35AP Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL35AP Gene

Sources for RPL35AP Gene

Content
Loading form....