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Aliases for RPL35AP Gene

Aliases for RPL35AP Gene

  • Ribosomal Protein L35a Pseudogene 2 3 5
  • RPL35A_15_1710 3
  • BA456N23.1 3

External Ids for RPL35AP Gene

Previous GeneCards Identifiers for RPL35AP Gene

  • GC20U990127
  • GC20M046745
  • GC20M046792
  • GC20M045540
  • GC20M046107
  • GC20M042848

Summaries for RPL35AP Gene

GeneCards Summary for RPL35AP Gene

RPL35AP (Ribosomal Protein L35a Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL35AP Gene

Genomics for RPL35AP Gene

Regulatory Elements for RPL35AP Gene

Enhancers for RPL35AP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20G047313 2.1 FANTOM5 Ensembl ENCODE dbSUPER 10.4 +151.3 151329 28.0 CREB3L1 MLX AGO1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 ZMYND8 RPL35AP RNU6-497P EYA2 LOC100131496 ENSG00000273451
GH20G047342 1.9 FANTOM5 ENCODE dbSUPER 10.5 +125.9 125852 21.0 MLX CREB3L1 ZFP64 DMAP1 FEZF1 YY1 SLC30A9 ZNF416 ZNF143 ZNF263 TP53RK ZNF663P ZNF334 LOC100419565 RPL35AP RNU6-497P MKRN7P NCOA3 SULF2 ZMYND8
GH20G047609 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.3 -131.7 -131701 1.8 FOXA2 ATF1 NFRKB NFXL1 ETV6 FOS CREM JUNB ELF1 ZNF623 NCOA3 RNU6-497P RPL35AP GC20P047622 GC20M047582
GH20G047500 1.4 ENCODE dbSUPER 12.2 -23.5 -23539 4.6 MLX CREB3L1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC SSRP1 ZNF610 NCOA3 RPL35AP GC20M047582
GH20G047505 1.4 Ensembl ENCODE dbSUPER 12.2 -27.6 -27571 2.7 HDGF KLF17 NFXL1 ZSCAN5C SCRT2 ETV6 RELB BCLAF1 ZEB2 PRDM6 NCOA3 RNU6-497P RPL35AP GC20M047582
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL35AP on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL35AP Gene

Chromosome:
20
Start:
47,478,214 bp from pter
End:
47,479,010 bp from pter
Size:
797 bases
Orientation:
Minus strand

Genomic View for RPL35AP Gene

Genes around RPL35AP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL35AP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL35AP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL35AP Gene

Proteins for RPL35AP Gene

Post-translational modifications for RPL35AP Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL35AP Gene

Domains & Families for RPL35AP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL35AP Gene

Function for RPL35AP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL35AP Gene

Localization for RPL35AP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL35AP Gene

Pathways & Interactions for RPL35AP Gene

SuperPathways for RPL35AP Gene

No Data Available

Interacting Proteins for RPL35AP Gene

Gene Ontology (GO) - Biological Process for RPL35AP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL35AP Gene

Transcripts for RPL35AP Gene

mRNA/cDNA for RPL35AP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL35AP Gene

No ASD Table

Relevant External Links for RPL35AP Gene

GeneLoc Exon Structure for
RPL35AP
ECgene alternative splicing isoforms for
RPL35AP

Expression for RPL35AP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL35AP Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL35AP Gene:

RPL35AP
genes like me logo Genes that share expression patterns with RPL35AP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL35AP Gene

Orthologs for RPL35AP Gene

Evolution for RPL35AP Gene

ENSEMBL:
Gene Tree for RPL35AP (if available)
TreeFam:
Gene Tree for RPL35AP (if available)

No data available for Orthologs for RPL35AP Gene

Paralogs for RPL35AP Gene

No data available for Paralogs for RPL35AP Gene

Variants for RPL35AP Gene

Relevant External Links for RPL35AP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL35AP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL35AP Gene

Disorders for RPL35AP Gene

No disorders were found for RPL35AP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL35AP Gene

Publications for RPL35AP Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL35AP Gene

Sources for RPL35AP Gene

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