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Aliases for RPL34P6 Gene

Subcategory (RNA class) for RPL34P6 Gene

lncRNA

Aliases for RPL34P6 Gene

  • Ribosomal Protein L34 Pseudogene 6 2 3 5
  • RPL34_4_146 3

External Ids for RPL34P6 Gene

ORGUL Members for RPL34P6 Gene

Previous GeneCards Identifiers for RPL34P6 Gene

  • GC01U902329

Summaries for RPL34P6 Gene

GeneCards Summary for RPL34P6 Gene

RPL34P6 (Ribosomal Protein L34 Pseudogene 6) is a Pseudogene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for RPL34P6 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for RPL34P6

Additional gene information for RPL34P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RPL34P6 Gene

Genomics for RPL34P6 Gene

GeneHancer (GH) Regulatory Elements for RPL34P6 Gene

Promoters and enhancers for RPL34P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I200861 Enhancer 1 ENCODE dbSUPER 550.8 -0.9 -909 2.2 HDGF PKNOX1 SMAD1 MAX EBF1 BATF KLF5 IRF4 RELA NFATC1 RPL34P6 INAVA CAMSAP2 LOC101929224 GC01M200787
GH01I200802 Enhancer 1 Ensembl ENCODE 0.2 -60.7 -60721 0.2 ELF3 HDGF RB1 ARNT SIN3A ZNF2 RAD21 RFX5 ARID2 ZNF366 DDX59 KIF14 GPR25 LOC101929224 GC01M200787 CAMSAP2 RPL34P6
GH01I200814 Enhancer 0.2 FANTOM5 0.2 -49.0 -49016 0.4 CAMSAP2 GC01M200787 RPL34P6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL34P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL34P6 Gene

Genomic Locations for RPL34P6 Gene
chr1:200,863,808-200,864,152
(GRCh38/hg38)
Size:
345 bases
Orientation:
Plus strand
chr1:200,832,936-200,833,280
(GRCh37/hg19)

Genomic View for RPL34P6 Gene

Genes around RPL34P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL34P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL34P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL34P6 Gene

ORGUL Member Location for RPL34P6 Gene

ORGUL Member Location for RPL34P6 gene

Proteins for RPL34P6 Gene

Post-translational modifications for RPL34P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL34P6 Gene

Domains & Families for RPL34P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL34P6 Gene

Function for RPL34P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL34P6 Gene

Localization for RPL34P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL34P6 Gene

Pathways & Interactions for RPL34P6 Gene

SuperPathways for RPL34P6 Gene

No Data Available

Interacting Proteins for RPL34P6 Gene

Gene Ontology (GO) - Biological Process for RPL34P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL34P6 Gene

Drugs & Compounds for RPL34P6 Gene

No Compound Related Data Available

Transcripts for RPL34P6 Gene

fRNAdb Secondary structures for RPL34P6 Gene

  • FR271559

mRNA/cDNA for RPL34P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL34P6 Gene

No ASD Table

Relevant External Links for RPL34P6 Gene

GeneLoc Exon Structure for
RPL34P6
ECgene alternative splicing isoforms for
RPL34P6

Expression for RPL34P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL34P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL34P6 Gene:

RPL34P6
genes like me logo Genes that share expression patterns with RPL34P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL34P6 Gene

Orthologs for RPL34P6 Gene

Evolution for RPL34P6 Gene

ENSEMBL:
Gene Tree for RPL34P6 (if available)
TreeFam:
Gene Tree for RPL34P6 (if available)

No data available for Orthologs for RPL34P6 Gene

Paralogs for RPL34P6 Gene

No data available for Paralogs for RPL34P6 Gene

Variants for RPL34P6 Gene

Additional Variant Information for RPL34P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL34P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL34P6 Gene

Disorders for RPL34P6 Gene

No disorders were found for RPL34P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL34P6 Gene

Publications for RPL34P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for RPL34P6 Gene

Sources for RPL34P6 Gene

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