Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL34P5 Gene

Aliases for RPL34P5 Gene

  • Ribosomal Protein L34 Pseudogene 5 2 3
  • RP11-422P24.9 5
  • RPL34_2_101 3

External Ids for RPL34P5 Gene

Previous GeneCards Identifiers for RPL34P5 Gene

  • GC01U902354
  • GC01P153969
  • GC01P153971
  • GC01P153973
  • GC01P153976
  • GC01P153982

Summaries for RPL34P5 Gene

GeneCards Summary for RPL34P5 Gene

RPL34P5 (Ribosomal Protein L34 Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL34P5 Gene

Genomics for RPL34P5 Gene

Regulatory Elements for RPL34P5 Gene

Enhancers for RPL34P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G153961 1.8 FANTOM5 ENCODE dbSUPER 11.9 -32.3 -32337 4.0 HDGF PKNOX1 AGO1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 CREB3L4 RAB13 RPS27 RPL34P5 ILF2 GATAD2B HAX1 C1orf189 JTB S100A16
GH01G153888 1 Ensembl ENCODE 10.5 -107.0 -106993 1.1 GATAD2A ELF3 IRF2 RNF2 TAL1 BHLHE40 ZNF7 RARA POLR2H ZNF121 GATAD2B CREB3L4 SLC39A1 DENND4B CRTC2 JTB RAB13 RPS27 RPL34P5 SLC27A3
GH01G153779 0.7 dbSUPER 10.5 -215.3 -215321 2.1 HDAC1 ESRRA NFIA NR2F1 TEAD2 THRB RARA NR2F2 TEAD3 NFIC ENSG00000243613 ENSG00000233222 INTS3 NPR1 ILF2 GATAD2B RAB13 RPL34P5 RPS27 HAX1
GH01G153780 0.7 dbSUPER 10.5 -215.3 -215325 1.4 HDAC1 ESRRA NFIA NR2F1 TEAD2 THRB RARA NR2F2 TEAD3 NFIC ENSG00000243613 ENSG00000233222 INTS3 NPR1 ILF2 GATAD2B RAB13 RPL34P5 RPS27 HAX1
GH01G153821 0.6 ENCODE 11.3 -174.1 -174133 0.1 CTCF ZNF654 TRIM22 REST RAD21 ZNF664 SMC3 MLLT1 ZNF600 GATAD2B DENND4B CRTC2 RPS27 RAB13 RPL34P5 SLC39A1 CREB3L4 JTB UBAP2L
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL34P5 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL34P5 Gene

Chromosome:
1
Start:
153,995,632 bp from pter
End:
153,995,963 bp from pter
Size:
332 bases
Orientation:
Plus strand

Genomic View for RPL34P5 Gene

Genes around RPL34P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL34P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL34P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL34P5 Gene

Proteins for RPL34P5 Gene

Post-translational modifications for RPL34P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL34P5 Gene

Domains & Families for RPL34P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL34P5 Gene

Function for RPL34P5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL34P5 Gene

Localization for RPL34P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL34P5 Gene

Pathways & Interactions for RPL34P5 Gene

SuperPathways for RPL34P5 Gene

No Data Available

Interacting Proteins for RPL34P5 Gene

Gene Ontology (GO) - Biological Process for RPL34P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL34P5 Gene

Transcripts for RPL34P5 Gene

mRNA/cDNA for RPL34P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL34P5 Gene

No ASD Table

Relevant External Links for RPL34P5 Gene

GeneLoc Exon Structure for
RPL34P5
ECgene alternative splicing isoforms for
RPL34P5

Expression for RPL34P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL34P5 Gene

mRNA differential expression in normal tissues according to GTEx for RPL34P5 Gene

This gene is overexpressed in Testis (x6.5).

NURSA nuclear receptor signaling pathways regulating expression of RPL34P5 Gene:

RPL34P5
genes like me logo Genes that share expression patterns with RPL34P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL34P5 Gene

Orthologs for RPL34P5 Gene

Evolution for RPL34P5 Gene

ENSEMBL:
Gene Tree for RPL34P5 (if available)
TreeFam:
Gene Tree for RPL34P5 (if available)

No data available for Orthologs for RPL34P5 Gene

Paralogs for RPL34P5 Gene

No data available for Paralogs for RPL34P5 Gene

Variants for RPL34P5 Gene

Relevant External Links for RPL34P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL34P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL34P5 Gene

Disorders for RPL34P5 Gene

No disorders were found for RPL34P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL34P5 Gene

Publications for RPL34P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL34P5 Gene

Sources for RPL34P5 Gene

Content
Loading form....