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Aliases for RPL34P20 Gene

Subcategory (RNA class) for RPL34P20 Gene

lncRNA

Aliases for RPL34P20 Gene

  • Ribosomal Protein L34 Pseudogene 20 2 3 5
  • RPL34_8_1088 3

External Ids for RPL34P20 Gene

ORGUL Members for RPL34P20 Gene

Previous GeneCards Identifiers for RPL34P20 Gene

  • GC10U901108
  • GC10M099153

Summaries for RPL34P20 Gene

GeneCards Summary for RPL34P20 Gene

RPL34P20 (Ribosomal Protein L34 Pseudogene 20) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL34P20 Gene

Genomics for RPL34P20 Gene

Regulatory Elements for RPL34P20 Gene

Enhancers for RPL34P20 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G097399 1.1 ENCODE 0.4 -7.3 -7330 2.5 FOXA2 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 FOS ZNF263 SP3 ZHX2 RRP12 ENSG00000200737 PGAM1 UBTD1 MMS19 ARHGAP19 ENSG00000231970 RPL34P20
GH10G097355 1.2 Ensembl ENCODE dbSUPER 0.3 +37.3 37279 2.1 SRF CTCF ZNF654 E2F5 USF2 MAX REST ZNF354B RAD21 FOXM1 RRP12 ARHGAP19 SLIT1 SLIT1-AS1 HOGA1 ENSG00000249967 C10orf62 PI4K2A PGAM1 FRAT2
GH10G097387 0.5 dbSUPER 0.7 +5.0 4982 1.3 CUX1 ZBTB33 ATF2 RRP12 ENSG00000200737 PGAM1 ARHGAP19 UBTD1 MMS19 HOGA1 ENSG00000249967 C10orf62 PI4K2A
GH10G097379 0.8 ENCODE 0.4 +12.7 12712 2.5 PKNOX1 JUN KLF17 ZIC2 GATA3 CTBP1 ZFHX2 EGR1 FOXK2 FOS RRP12 ARHGAP19 ENSG00000200737 PGAM1 RPL34P20 FRAT2
GH10G097353 1 FANTOM5 Ensembl dbSUPER 0.3 +39.3 39347 1.6 CTCF ATF2 RRP12 ARHGAP19 PI4K2A SLIT1 SLIT1-AS1 HOGA1 ENSG00000249967 C10orf62 FRAT1 FRAT2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL34P20 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL34P20 Gene

Chromosome:
10
Start:
97,393,197 bp from pter
End:
97,393,547 bp from pter
Size:
351 bases
Orientation:
Minus strand

Genomic View for RPL34P20 Gene

Genes around RPL34P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL34P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL34P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL34P20 Gene

Proteins for RPL34P20 Gene

Post-translational modifications for RPL34P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL34P20 Gene

Domains & Families for RPL34P20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL34P20 Gene

Function for RPL34P20 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL34P20 Gene

Localization for RPL34P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL34P20 Gene

Pathways & Interactions for RPL34P20 Gene

SuperPathways for RPL34P20 Gene

No Data Available

Interacting Proteins for RPL34P20 Gene

Gene Ontology (GO) - Biological Process for RPL34P20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL34P20 Gene

Transcripts for RPL34P20 Gene

mRNA/cDNA for RPL34P20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL34P20 Gene

No ASD Table

Relevant External Links for RPL34P20 Gene

GeneLoc Exon Structure for
RPL34P20
ECgene alternative splicing isoforms for
RPL34P20

Expression for RPL34P20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL34P20 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL34P20 Gene:

RPL34P20
genes like me logo Genes that share expression patterns with RPL34P20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL34P20 Gene

Orthologs for RPL34P20 Gene

Evolution for RPL34P20 Gene

ENSEMBL:
Gene Tree for RPL34P20 (if available)
TreeFam:
Gene Tree for RPL34P20 (if available)

No data available for Orthologs for RPL34P20 Gene

Paralogs for RPL34P20 Gene

No data available for Paralogs for RPL34P20 Gene

Variants for RPL34P20 Gene

Relevant External Links for RPL34P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL34P20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL34P20 Gene

Disorders for RPL34P20 Gene

No disorders were found for RPL34P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL34P20 Gene

Publications for RPL34P20 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL34P20 Gene

Sources for RPL34P20 Gene

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