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Aliases for RPL34-AS1 Gene

Subcategory (RNA class) for RPL34-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for RPL34-AS1 Gene

  • RPL34 Antisense RNA 1 (Head To Head) 2 3 5
  • RPL34 Antisense RNA 1 (Non-Protein Coding) 2 3
  • RPL34 Antisense RNA 1 2
  • RP11-462C24.1 3

External Ids for RPL34-AS1 Gene

Previous GeneCards Identifiers for RPL34-AS1 Gene

  • GC04M109461

Summaries for RPL34-AS1 Gene

GeneCards Summary for RPL34-AS1 Gene

RPL34-AS1 (RPL34 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for RPL34-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL34-AS1 Gene

Genomics for RPL34-AS1 Gene

Regulatory Elements for RPL34-AS1 Gene

Enhancers for RPL34-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H108610 1.9 VISTA dbSUPER 9.5 +8.9 8930 1.6 CTCF RPL34 RPL34-AS1 GC04P108610
GH04H108591 1 Ensembl ENCODE 16.9 +28.0 28001 1.1 SOX13 FOXA2 JUN ZNF644 RARA ZNF366 RERE HOMEZ GATAD2A HMG20B RPL34-AS1 RPL34 PIR53246 GC04P108610
GH04H108618 1.4 ENCODE dbSUPER 9.4 -0.6 -559 4.2 HNRNPUL1 PKNOX1 FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 RPL34 SEC24B SETP20 RPL34-AS1 PIR53159
GH04H108071 1 ENCODE dbSUPER 9.8 +547.9 547899 2.5 PKNOX1 KLF1 FEZF1 ZNF384 ZIC2 ZNF366 SCRT2 ATF7 KLF7 RUNX3 RPL34 RPL34-AS1 CYP2U1 HADH GC04M107959 GC04P108129
GH04H108030 1 ENCODE dbSUPER 9.8 +589.8 589751 1.9 CTCF RFX1 TRIM22 CEBPB CEBPG REST RAD21 RELA POLR2A ZNF157 HADH LOC101929595 RPL34 RPL34-AS1 GC04M107959 GC04P107997
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL34-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for RPL34-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Locations for RPL34-AS1 Gene

Genomic Locations for RPL34-AS1 Gene
82,271 bases
Minus strand

Genomic View for RPL34-AS1 Gene

Genes around RPL34-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL34-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL34-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL34-AS1 Gene

Proteins for RPL34-AS1 Gene

Post-translational modifications for RPL34-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL34-AS1 Gene

Domains & Families for RPL34-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL34-AS1 Gene

Function for RPL34-AS1 Gene

Phenotypes From GWAS Catalog for RPL34-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL34-AS1 Gene

Localization for RPL34-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL34-AS1 Gene

Pathways & Interactions for RPL34-AS1 Gene

SuperPathways for RPL34-AS1 Gene

No Data Available

Interacting Proteins for RPL34-AS1 Gene

Gene Ontology (GO) - Biological Process for RPL34-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL34-AS1 Gene

Drugs & Compounds for RPL34-AS1 Gene

No Compound Related Data Available

Transcripts for RPL34-AS1 Gene

mRNA/cDNA for RPL34-AS1 Gene

(1) REFSEQ mRNAs :
(5) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPL34-AS1 Gene

RPL34 antisense RNA 1 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPL34-AS1 Gene

No ASD Table

Relevant External Links for RPL34-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL34-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL34-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for RPL34-AS1 Gene

This gene is overexpressed in Testis (x7.7).

SOURCE GeneReport for Unigene cluster for RPL34-AS1 Gene:

genes like me logo Genes that share expression patterns with RPL34-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL34-AS1 Gene

Orthologs for RPL34-AS1 Gene

Evolution for RPL34-AS1 Gene

Gene Tree for RPL34-AS1 (if available)
Gene Tree for RPL34-AS1 (if available)

No data available for Orthologs for RPL34-AS1 Gene

Paralogs for RPL34-AS1 Gene

No data available for Paralogs for RPL34-AS1 Gene

Variants for RPL34-AS1 Gene

Sequence variations from dbSNP and Humsavar for RPL34-AS1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1000003147 -- 108,600,308(+) TGAAA(A/G)TAATG intron-variant
rs1000017473 -- 108,549,212(+) GAAAC(A/G)TTGGT intron-variant
rs1000027307 -- 108,568,603(+) TAACG(C/G)AGCAC intron-variant
rs1000029567 -- 108,609,958(+) TCACA(A/G)TTCTG intron-variant
rs1000057427 -- 108,617,623(+) CAAGA(A/G)AAAAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RPL34-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1139296 CNV deletion 24896259
esv3601723 CNV gain 21293372

Relevant External Links for RPL34-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPL34-AS1 Gene

Disorders for RPL34-AS1 Gene

Relevant External Links for RPL34-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for RPL34-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL34-AS1 Gene

Publications for RPL34-AS1 Gene

  1. Long non-coding RNAs LOC285194, RP11-462C24.1 and Nbla12061 in serum provide a new approach for distinguishing patients with colorectal cancer from healthy controls. (PMID: 27683121) Wang C … Qi P (Oncotarget 2016) 2 3 60
  2. Low expression of novel lncRNA RP11-462C24.1 suggests a biomarker of poor prognosis in colorectal cancer. (PMID: 24908062) Shi D … Cai S (Medical oncology (Northwood, London, England) 2014) 2 3 60
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for RPL34-AS1 Gene

Sources for RPL34-AS1 Gene

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