Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL34-AS1 Gene

Subcategory (RNA class) for RPL34-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for RPL34-AS1 Gene

  • RPL34 Antisense RNA 1 (Head To Head) 2 3
  • RPL34 Antisense RNA 1 (Non-Protein Coding) 2 3
  • RPL34 Antisense RNA 1 2
  • RP11-462C24.1 3

External Ids for RPL34-AS1 Gene

ORGUL Members for RPL34-AS1 Gene

Previous GeneCards Identifiers for RPL34-AS1 Gene

  • GC04M109461

Summaries for RPL34-AS1 Gene

GeneCards Summary for RPL34-AS1 Gene

RPL34-AS1 (RPL34 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL34-AS1 Gene

Genomics for RPL34-AS1 Gene

Genomic Location for RPL34-AS1 Gene

Start:
108,538,190 bp from pter
End:
108,620,460 bp from pter
Size:
82,271 bases
Orientation:
Minus strand

Genomic View for RPL34-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RPL34-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL34-AS1 Gene

No data available for Regulatory Elements for RPL34-AS1 Gene

Proteins for RPL34-AS1 Gene

Post-translational modifications for RPL34-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL34-AS1 Gene

Domains for RPL34-AS1 Gene

Gene Families for RPL34-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RPL34-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL34-AS1 Gene

Function for RPL34-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RPL34-AS1 Gene

Localization for RPL34-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL34-AS1 Gene

Pathways for RPL34-AS1 Gene

SuperPathways for RPL34-AS1 Gene

No Data Available

Interacting Proteins for RPL34-AS1 Gene

Gene Ontology (GO) - Biological Process for RPL34-AS1 Gene

None

No data available for Pathways by source for RPL34-AS1 Gene

Transcripts for RPL34-AS1 Gene

mRNA/cDNA for RPL34-AS1 Gene

(1) REFSEQ mRNAs :
(5) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPL34-AS1 Gene

RPL34 antisense RNA 1 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPL34-AS1 Gene

No ASD Table

Relevant External Links for RPL34-AS1 Gene

GeneLoc Exon Structure for
RPL34-AS1
ECgene alternative splicing isoforms for
RPL34-AS1

Expression for RPL34-AS1 Gene

mRNA expression in normal human tissues for RPL34-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for RPL34-AS1 Gene

This gene is overexpressed in Testis (7.7).

SOURCE GeneReport for Unigene cluster for RPL34-AS1 Gene Hs.683863

genes like me logo Genes that share expressions with RPL34-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for RPL34-AS1 Gene

Orthologs for RPL34-AS1 Gene

Evolution for RPL34-AS1 Gene

ENSEMBL:
Gene Tree for RPL34-AS1 (if available)
TreeFam:
Gene Tree for RPL34-AS1 (if available)

No data available for Orthologs for RPL34-AS1 Gene

Paralogs for RPL34-AS1 Gene

No data available for Paralogs for RPL34-AS1 Gene

Variants for RPL34-AS1 Gene

Sequence variations from dbSNP and Humsavar for RPL34-AS1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs729573 -- 108,601,737(-) ggggc(A/G)gggga intron-variant
rs957623 -- 108,577,579(-) AGGAG(A/C/G/T)AATTT intron-variant
rs960012 -- 108,577,696(-) ATGTA(A/C/G/T)TACAG intron-variant
rs973643 -- 108,555,094(+) AAAAG(G/T)TATAT intron-variant
rs1017430 -- 108,552,906(+) TTAAA(A/G)AAATT intron-variant

Relevant External Links for RPL34-AS1 Gene

HapMap Linkage Disequilibrium report
RPL34-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for RPL34-AS1 Gene

Disorders for RPL34-AS1 Gene

No disorders were found for RPL34-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for RPL34-AS1 Gene

Publications for RPL34-AS1 Gene

  1. Low expression of novel lncRNA RP11-462C24.1 suggests a biomarker of poor prognosis in colorectal cancer. (PMID: 24908062) Shi D. … Cai S. (Med. Oncol. 2014) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for RPL34-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate RPL34-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for RPL34-AS1
    • Block miRNA regulation of RPL34-AS1 using miScript Target Protectors

    Sources for RPL34-AS1 Gene

    Back to Top

    Content