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RPL31P50 Gene(Pseudogene)

Ribosomal Protein L31 Pseudogene 50

GCID:
GC12M031597
GIFtS:
9
Genes Participants
UDN Logo

Aliases for RPL31P50 Gene

Subcategory (RNA class) for RPL31P50 Gene

lncRNA

Aliases for RPL31P50 Gene

  • Ribosomal Protein L31 Pseudogene 50 2 3 5
  • RPL31_16_1224 3
  • HCG1644239 3

External Ids for RPL31P50 Gene

ORGUL Members for RPL31P50 Gene

Previous GeneCards Identifiers for RPL31P50 Gene

  • GC12M031647
  • GC12M031751
  • GC12M031753
  • GC12M031756

Summaries for RPL31P50 Gene

GeneCards Summary for RPL31P50 Gene

RPL31P50 (Ribosomal Protein L31 Pseudogene 50) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL31P50 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL31P50 Gene

Genomics for RPL31P50 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RPL31P50 Gene

Promoters and enhancers for RPL31P50 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH12I031594 Enhancer 0.3 ENCODE 0.8 +2.6 2574 1 HLF GC12M031595 RNU5F-4P DENND5B-AS1 RPL31P50
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL31P50 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL31P50 Gene

Genomic Locations for RPL31P50 Gene
chr12:31,597,106-31,597,409
(GRCh38/hg38)
Size:
304 bases
Orientation:
Minus strand
chr12:31,750,040-31,750,343
(GRCh37/hg19)

Genomic View for RPL31P50 Gene

Genes around RPL31P50 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P50 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P50 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL31P50 Gene

Proteins for RPL31P50 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL31P50 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P50 Gene

Domains & Families for RPL31P50 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL31P50 Gene

Function for RPL31P50 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes for RPL31P50 Gene

GenomeRNAi human phenotypes for RPL31P50:
genes like me logo Genes that share phenotypes with RPL31P50: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P50 Gene

Localization for RPL31P50 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL31P50 Gene

Pathways & Interactions for RPL31P50 Gene

SuperPathways for RPL31P50 Gene

PathCards logo More details on SuperPathways for RPL31P50
No Data Available

Interacting Proteins for RPL31P50 Gene

Gene Ontology (GO) - Biological Process for RPL31P50 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL31P50 Gene

Drugs & Compounds for RPL31P50 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL31P50 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPL31P50 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P50 Gene

No ASD Table

Relevant External Links for RPL31P50 Gene

GeneLoc Exon Structure for
RPL31P50
ECgene alternative splicing isoforms for
RPL31P50

Expression for RPL31P50 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL31P50 Gene

mRNA expression in normal human tissues for RPL31P50 Gene
mRNA expression by GTEx for RPL31P50 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL31P50 Gene:

RPL31P50
genes like me logo Genes that share expression patterns with RPL31P50: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P50 Gene

Orthologs for RPL31P50 Gene

Evolution for RPL31P50 Gene

ENSEMBL:
Gene Tree for RPL31P50 (if available)
TreeFam:
Gene Tree for RPL31P50 (if available)

No data available for Orthologs for RPL31P50 Gene

Paralogs for RPL31P50 Gene

No data available for Paralogs for RPL31P50 Gene

Variants for RPL31P50 Gene

Additional Variant Information for RPL31P50 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P50

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P50 Gene

Disorders for RPL31P50 Gene

No disorders were found for RPL31P50 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL31P50 Gene

Publications for RPL31P50 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for RPL31P50 Gene

Sources for RPL31P50 Gene

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