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Aliases for RPL31P43 Gene

Aliases for RPL31P43 Gene

  • Ribosomal Protein L31 Pseudogene 43 2 3
  • RPL31_21_1004 3
  • RP11-240E2.2 5

External Ids for RPL31P43 Gene

Previous GeneCards Identifiers for RPL31P43 Gene

  • GC09P109842
  • GC09P110804

Summaries for RPL31P43 Gene

GeneCards Summary for RPL31P43 Gene

RPL31P43 (Ribosomal Protein L31 Pseudogene 43) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL31P43 Gene

Genomics for RPL31P43 Gene

Regulatory Elements for RPL31P43 Gene

Enhancers for RPL31P43 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F108883 1.1 Ensembl ENCODE 4.6 +846.2 846234 8.1 ATF1 MLX WRNIP1 ARID4B DMAP1 ZNF48 YY1 SLC30A9 GATA2 FOS CTNNAL1 IKBKAP FRRS1L ACTL7A ACTL7B FAM206A EPB41L4B TMEM245 RPL31P43
GH09F108039 1.2 FANTOM5 Ensembl ENCODE 0.8 +0.7 675 3.6 JUN CEBPG BMI1 GATA3 RCOR1 NFE2 TRIM24 FOS FOSL2 MAFK RPL31P43 LOC105376213
GH09F108048 1.1 Ensembl ENCODE 0.4 +9.4 9385 2.7 PKNOX1 ATF1 SIN3A FEZF1 FOS TSHZ1 REST MAFF SMARCA4 PBX2 RPL31P43 LOC105376213
GH09F108034 0.2 ENCODE 0.4 -5.2 -5182 1.9 BHLHE40 ZNF664 JUND ZFHX2 FOS PRDM10 MAFK EGR2 RPL31P43 RPS15AP27
GH09F108052 1.2 FANTOM5 Ensembl ENCODE 0.3 +15.4 15416 6.4 TBP PKNOX1 FEZF1 RAD21 ZBTB40 ZNF2 RFX5 RCOR1 FOS ZNF263 RPL31P43 LOC105376213
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL31P43 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL31P43 Gene

Chromosome:
9
Start:
108,040,185 bp from pter
End:
108,040,630 bp from pter
Size:
446 bases
Orientation:
Plus strand

Genomic View for RPL31P43 Gene

Genes around RPL31P43 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P43 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P43 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL31P43 Gene

Proteins for RPL31P43 Gene

Post-translational modifications for RPL31P43 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P43 Gene

Domains & Families for RPL31P43 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL31P43 Gene

Function for RPL31P43 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P43 Gene

Localization for RPL31P43 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL31P43 Gene

Pathways & Interactions for RPL31P43 Gene

SuperPathways for RPL31P43 Gene

No Data Available

Interacting Proteins for RPL31P43 Gene

Gene Ontology (GO) - Biological Process for RPL31P43 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL31P43 Gene

Transcripts for RPL31P43 Gene

mRNA/cDNA for RPL31P43 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P43 Gene

No ASD Table

Relevant External Links for RPL31P43 Gene

GeneLoc Exon Structure for
RPL31P43
ECgene alternative splicing isoforms for
RPL31P43

Expression for RPL31P43 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL31P43 Gene

mRNA differential expression in normal tissues according to GTEx for RPL31P43 Gene

This gene is overexpressed in Testis (x10.8), Skin - Sun Exposed (Lower leg) (x6.8), and Whole Blood (x5.7).

NURSA nuclear receptor signaling pathways regulating expression of RPL31P43 Gene:

RPL31P43
genes like me logo Genes that share expression patterns with RPL31P43: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL31P43 Gene

Orthologs for RPL31P43 Gene

Evolution for RPL31P43 Gene

ENSEMBL:
Gene Tree for RPL31P43 (if available)
TreeFam:
Gene Tree for RPL31P43 (if available)

No data available for Orthologs for RPL31P43 Gene

Paralogs for RPL31P43 Gene

No data available for Paralogs for RPL31P43 Gene

Variants for RPL31P43 Gene

Relevant External Links for RPL31P43 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P43

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P43 Gene

Disorders for RPL31P43 Gene

Relevant External Links for RPL31P43

Genetic Association Database (GAD)
RPL31P43

No disorders were found for RPL31P43 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL31P43 Gene

Publications for RPL31P43 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q. … O'Donnell C.J. (BMC Med. Genet. 2007) 46 64
  3. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel D.P. … Karasik D. (BMC Med. Genet. 2007) 46 64
  4. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs J.B. … Dupuis J. (BMC Med. Genet. 2007) 46 64
  5. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 46 64

Products for RPL31P43 Gene

Sources for RPL31P43 Gene

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