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Aliases for RPL31P43 Gene

Aliases for RPL31P43 Gene

  • Ribosomal Protein L31 Pseudogene 43 2 3
  • RPL31_21_1004 3
  • RP11-240E2.2 5

External Ids for RPL31P43 Gene

Previous GeneCards Identifiers for RPL31P43 Gene

  • GC09P109842
  • GC09P110804

Summaries for RPL31P43 Gene

GeneCards Summary for RPL31P43 Gene

RPL31P43 (Ribosomal Protein L31 Pseudogene 43) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL31P43 Gene

Genomics for RPL31P43 Gene

Regulatory Elements for RPL31P43 Gene

Enhancers for RPL31P43 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G108883 1 ENCODE 4.6 +846.2 846234 8.1 FOXA2 MLX WRNIP1 ARID4B DMAP1 YY1 SLC30A9 FOS PAF1 SP5 CTNNAL1 ELP1 FRRS1L ACTL7A ACTL7B FAM206A EPB41L4B TMEM245 RPL31P43
GH09G108039 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +0.7 675 3.6 JUN BMI1 CEBPG FOSL1 IRF9 GATA3 GATA2 EGR1 RCOR1 FOSL2 RPL31P43 LOC105376213
GH09G108055 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +16.8 16842 3.3 GTF2F1 FOXA2 JUN ZMYM3 MAX RAD21 ZBTB40 RFX5 ZKSCAN1 GATA2 RPL31P43 LOC105376213
GH09G108048 1.5 Ensembl ENCODE dbSUPER 0.4 +9.4 9385 2.7 PKNOX1 ATF1 SIN3A FEZF1 TCF12 ZNF766 GATA2 FOS TSHZ1 REST RPL31P43 LOC105376213
GH09G108053 1.3 Ensembl ENCODE dbSUPER 0.4 +13.9 13850 2.1 TBP PKNOX1 FEZF1 ZNF2 RCOR1 IKZF2 ZNF263 USF2 CEBPB ZEB2 RPL31P43 LOC105376213
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL31P43 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL31P43 Gene

Chromosome:
9
Start:
108,040,185 bp from pter
End:
108,040,630 bp from pter
Size:
446 bases
Orientation:
Plus strand

Genomic View for RPL31P43 Gene

Genes around RPL31P43 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P43 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P43 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL31P43 Gene

Proteins for RPL31P43 Gene

Post-translational modifications for RPL31P43 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P43 Gene

Domains & Families for RPL31P43 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL31P43 Gene

Function for RPL31P43 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P43 Gene

Localization for RPL31P43 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL31P43 Gene

Pathways & Interactions for RPL31P43 Gene

SuperPathways for RPL31P43 Gene

No Data Available

Interacting Proteins for RPL31P43 Gene

Gene Ontology (GO) - Biological Process for RPL31P43 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL31P43 Gene

Drugs & Compounds for RPL31P43 Gene

No Compound Related Data Available

Transcripts for RPL31P43 Gene

mRNA/cDNA for RPL31P43 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P43 Gene

No ASD Table

Relevant External Links for RPL31P43 Gene

GeneLoc Exon Structure for
RPL31P43
ECgene alternative splicing isoforms for
RPL31P43

Expression for RPL31P43 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL31P43 Gene

mRNA differential expression in normal tissues according to GTEx for RPL31P43 Gene

This gene is overexpressed in Testis (x10.8), Skin - Sun Exposed (Lower leg) (x6.8), and Whole Blood (x5.7).

NURSA nuclear receptor signaling pathways regulating expression of RPL31P43 Gene:

RPL31P43
genes like me logo Genes that share expression patterns with RPL31P43: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P43 Gene

Orthologs for RPL31P43 Gene

Evolution for RPL31P43 Gene

ENSEMBL:
Gene Tree for RPL31P43 (if available)
TreeFam:
Gene Tree for RPL31P43 (if available)

No data available for Orthologs for RPL31P43 Gene

Paralogs for RPL31P43 Gene

No data available for Paralogs for RPL31P43 Gene

Variants for RPL31P43 Gene

Relevant External Links for RPL31P43 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P43

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P43 Gene

Disorders for RPL31P43 Gene

Relevant External Links for RPL31P43

Genetic Association Database (GAD)
RPL31P43

No disorders were found for RPL31P43 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL31P43 Gene

Publications for RPL31P43 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q. … O'Donnell C.J. (BMC Med. Genet. 2007) 46 64
  3. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel D.P. … Karasik D. (BMC Med. Genet. 2007) 46 64
  4. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs J.B. … Dupuis J. (BMC Med. Genet. 2007) 46 64
  5. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 46 64

Products for RPL31P43 Gene

Sources for RPL31P43 Gene

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