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Aliases for RPL31P29 Gene

Subcategory (RNA class) for RPL31P29 Gene

lncRNA

Aliases for RPL31P29 Gene

  • Ribosomal Protein L31 Pseudogene 29 2 3
  • RP11-134L4.2 5
  • RPL31_9_773 3

External Ids for RPL31P29 Gene

ORGUL Members for RPL31P29 Gene

Previous GeneCards Identifiers for RPL31P29 Gene

  • GC06U901634
  • GC06M154927

Summaries for RPL31P29 Gene

GeneCards Summary for RPL31P29 Gene

RPL31P29 (Ribosomal Protein L31 Pseudogene 29) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL31P29 Gene

Genomics for RPL31P29 Gene

Regulatory Elements for RPL31P29 Gene

Enhancers for RPL31P29 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G154606 1.2 FANTOM5 ENCODE 0.7 -0.6 -643 0.4 HDGF TBP PKNOX1 BMI1 EGR1 ZNF143 ZNF207 RELB ETV6 IKZF2 CNKSR3 SCAF8 RPL31P29 GC06P154648
GH06G154605 0.8 ENCODE 0.7 +0.5 533 0.2 PKNOX1 BACH1 EBF1 ZBTB40 ARID3A EED ZSCAN5C RELB IKZF2 CREM RPL31P29 GC06P154578
GH06G154612 1.3 Ensembl ENCODE 0.4 -8.6 -8589 3.1 HDGF PKNOX1 CREB3L1 FEZF1 ZNF2 CBX5 FOS ZNF263 SP3 REST SCAF8 CNKSR3 RPL31P29 GC06P154648
GH06G154592 1.3 FANTOM5 Ensembl ENCODE 0.4 +12.6 12603 1.5 BCOR LEF1 PKNOX1 CEBPG FOSL1 GATA2 ZNF547 CREM L3MBTL2 DPF2 CNKSR3 RPL31P29 GC06P154578
GH06G154590 0.6 ENCODE 0.4 +15.0 14953 0.2 ZNF217 CTBP1 GATA3 NFIB FOS HNF4A FOXA1 RPL31P29 GC06P154578
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL31P29 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL31P29 Gene

Chromosome:
6
Start:
154,605,616 bp from pter
End:
154,605,954 bp from pter
Size:
339 bases
Orientation:
Minus strand

Genomic View for RPL31P29 Gene

Genes around RPL31P29 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P29 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P29 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL31P29 Gene

Proteins for RPL31P29 Gene

Post-translational modifications for RPL31P29 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P29 Gene

Domains & Families for RPL31P29 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL31P29 Gene

Function for RPL31P29 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P29 Gene

Localization for RPL31P29 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL31P29 Gene

Pathways & Interactions for RPL31P29 Gene

SuperPathways for RPL31P29 Gene

No Data Available

Interacting Proteins for RPL31P29 Gene

Gene Ontology (GO) - Biological Process for RPL31P29 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL31P29 Gene

Drugs & Compounds for RPL31P29 Gene

No Compound Related Data Available

Transcripts for RPL31P29 Gene

mRNA/cDNA for RPL31P29 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P29 Gene

No ASD Table

Relevant External Links for RPL31P29 Gene

GeneLoc Exon Structure for
RPL31P29
ECgene alternative splicing isoforms for
RPL31P29

Expression for RPL31P29 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL31P29 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL31P29 Gene:

RPL31P29
genes like me logo Genes that share expression patterns with RPL31P29: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P29 Gene

Orthologs for RPL31P29 Gene

Evolution for RPL31P29 Gene

ENSEMBL:
Gene Tree for RPL31P29 (if available)
TreeFam:
Gene Tree for RPL31P29 (if available)

No data available for Orthologs for RPL31P29 Gene

Paralogs for RPL31P29 Gene

No data available for Paralogs for RPL31P29 Gene

Variants for RPL31P29 Gene

Relevant External Links for RPL31P29 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P29

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P29 Gene

Disorders for RPL31P29 Gene

No disorders were found for RPL31P29 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL31P29 Gene

Publications for RPL31P29 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL31P29 Gene

Sources for RPL31P29 Gene

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