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Aliases for RPL31P16 Gene

Subcategory (RNA class) for RPL31P16 Gene

lncRNA

Aliases for RPL31P16 Gene

  • Ribosomal Protein L31 Pseudogene 16 2 3
  • RPL31_3_207 3
  • AC007390.4 5

External Ids for RPL31P16 Gene

ORGUL Members for RPL31P16 Gene

Previous GeneCards Identifiers for RPL31P16 Gene

  • GC02M037276
  • GC02M037422
  • GC02M037426
  • GC02M037431
  • GC02M037436
  • GC02M037440

Summaries for RPL31P16 Gene

GeneCards Summary for RPL31P16 Gene

RPL31P16 (Ribosomal Protein L31 Pseudogene 16) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL31P16 Gene

Genomics for RPL31P16 Gene

Regulatory Elements for RPL31P16 Gene

Enhancers for RPL31P16 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F037375 1 FANTOM5 Ensembl ENCODE 16.2 -182.8 -182774 3.3 PKNOX1 FEZF1 ZNF2 CBX5 SP3 JUNB REST TSHZ1 ZNF488 TBX21 RPL31P16 SULT6B1 LOC100422559 LOC101929542 PRKD3 RNU6-939P CDC42EP3 RMDN2 CYP1B1 QPCT
GH02F038095 0.8 FANTOM5 ENCODE 16.2 -902.5 -902509 4.5 PKNOX1 FEZF1 GLIS2 KLF7 FOS SP3 TSHZ1 PPARG ZNF518A ZNF623 CYP1B1 CYP1B1-AS1 LINC01883 TTC39DP ENSG00000225284 RPL31P16 SULT6B1 ARHGEF33 RMDN2-AS1 CDC42EP3
GH02F037154 0.8 ENCODE 10.9 +38.2 38239 3.1 HDGF PKNOX1 WRNIP1 ARID4B SIN3A DMAP1 ZNF48 BRCA1 SP3 SP5 NDUFAF7 EIF2AK2 CEBPZOS RPL31P16 SULT6B1 CEBPZ ENSG00000224891
GH02F037149 1.1 ENCODE 10.9 +44.8 44823 1.2 PKNOX1 ATF1 FEZF1 ZNF2 CBX5 ZNF207 ZNF263 SP3 NFYC JUNB RPL31P16 CEBPZOS SULT6B1 CEBPZ NDUFAF7 EIF2AK2 STRN ENSG00000224891
GH02F037189 1.2 Ensembl ENCODE 0.8 +4.6 4592 1.7 ELF3 ARID4B RAD21 RARA SLC30A9 SCRT2 FOS MIXL1 THAP11 SP3 EIF2AK2 NDUFAF7 CEBPZOS CEBPZ RPL31P16
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL31P16 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL31P16 Gene

Chromosome:
2
Start:
37,194,379 bp from pter
End:
37,194,759 bp from pter
Size:
381 bases
Orientation:
Minus strand

Genomic View for RPL31P16 Gene

Genes around RPL31P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL31P16 Gene

Proteins for RPL31P16 Gene

Post-translational modifications for RPL31P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P16 Gene

Domains & Families for RPL31P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL31P16 Gene

Function for RPL31P16 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P16 Gene

Localization for RPL31P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL31P16 Gene

Pathways & Interactions for RPL31P16 Gene

SuperPathways for RPL31P16 Gene

No Data Available

Interacting Proteins for RPL31P16 Gene

Gene Ontology (GO) - Biological Process for RPL31P16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL31P16 Gene

Transcripts for RPL31P16 Gene

mRNA/cDNA for RPL31P16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P16 Gene

No ASD Table

Relevant External Links for RPL31P16 Gene

GeneLoc Exon Structure for
RPL31P16
ECgene alternative splicing isoforms for
RPL31P16

Expression for RPL31P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL31P16 Gene

mRNA differential expression in normal tissues according to GTEx for RPL31P16 Gene

This gene is overexpressed in Testis (x39.5) and Whole Blood (x10.2).

NURSA nuclear receptor signaling pathways regulating expression of RPL31P16 Gene:

RPL31P16
genes like me logo Genes that share expression patterns with RPL31P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL31P16 Gene

Orthologs for RPL31P16 Gene

Evolution for RPL31P16 Gene

ENSEMBL:
Gene Tree for RPL31P16 (if available)
TreeFam:
Gene Tree for RPL31P16 (if available)

No data available for Orthologs for RPL31P16 Gene

Paralogs for RPL31P16 Gene

No data available for Paralogs for RPL31P16 Gene

Variants for RPL31P16 Gene

Relevant External Links for RPL31P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P16 Gene

Disorders for RPL31P16 Gene

No disorders were found for RPL31P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL31P16 Gene

Publications for RPL31P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL31P16 Gene

Sources for RPL31P16 Gene

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