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Aliases for RPL30P5 Gene

Subcategory (RNA class) for RPL30P5 Gene

lncRNA

Aliases for RPL30P5 Gene

  • Ribosomal Protein L30 Pseudogene 5 2 3 5
  • RPL30_2_497 3

External Ids for RPL30P5 Gene

ORGUL Members for RPL30P5 Gene

Previous GeneCards Identifiers for RPL30P5 Gene

  • GC04U901032
  • GC04P084424

Summaries for RPL30P5 Gene

GeneCards Summary for RPL30P5 Gene

RPL30P5 (Ribosomal Protein L30 Pseudogene 5) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL30P5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL30P5 Gene

Genomics for RPL30P5 Gene

GeneHancer (GH) Regulatory Elements for RPL30P5 Gene

Promoters and enhancers for RPL30P5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I083484 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 -17.6 -17560 2.3 HDGF CLOCK ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 POLR2B ABRAXAS1 HELQ MRPS18C SEC31A GPAT3 SLC25A14P1 RPL30P5
GH04I083504 Enhancer 0.5 Ensembl ENCODE 0.8 +2.1 2101 1 GATA3 GPAT3 MRPS18C RPL30P5 ABRAXAS1
GH04I083486 Enhancer 0.8 ENCODE 0.4 -16.1 -16146 0.2 ATF1 FOXA2 ARID4B TCF12 ATF7 CREM CEBPB ZNF592 NFIL3 ATF4 GPAT3 SLC25A14P1 RPL30P5 ABRAXAS1
GH04I083516 Enhancer 0.2 ENCODE 0.4 +13.5 13534 0.2 HELQ MRPS18C ABRAXAS1 RPL30P5
GH04I083477 Enhancer 0.2 FANTOM5 0.3 -25.0 -25044 0.4 SLC25A14P1 MRPS18C GPAT3 RPL30P5 ABRAXAS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL30P5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL30P5 Gene

Genomic Locations for RPL30P5 Gene
chr4:83,502,699-83,503,034
(GRCh38/hg38)
Size:
336 bases
Orientation:
Plus strand
chr4:84,423,852-84,424,187
(GRCh37/hg19)

Genomic View for RPL30P5 Gene

Genes around RPL30P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL30P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL30P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL30P5 Gene

Proteins for RPL30P5 Gene

Post-translational modifications for RPL30P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL30P5 Gene

Domains & Families for RPL30P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL30P5 Gene

Function for RPL30P5 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL30P5 Gene

Localization for RPL30P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL30P5 Gene

Pathways & Interactions for RPL30P5 Gene

SuperPathways for RPL30P5 Gene

No Data Available

Interacting Proteins for RPL30P5 Gene

Gene Ontology (GO) - Biological Process for RPL30P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL30P5 Gene

Drugs & Compounds for RPL30P5 Gene

No Compound Related Data Available

Transcripts for RPL30P5 Gene

mRNA/cDNA for RPL30P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL30P5 Gene

No ASD Table

Relevant External Links for RPL30P5 Gene

GeneLoc Exon Structure for
RPL30P5
ECgene alternative splicing isoforms for
RPL30P5

Expression for RPL30P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL30P5 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL30P5 Gene:

RPL30P5
genes like me logo Genes that share expression patterns with RPL30P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL30P5 Gene

Orthologs for RPL30P5 Gene

Evolution for RPL30P5 Gene

ENSEMBL:
Gene Tree for RPL30P5 (if available)
TreeFam:
Gene Tree for RPL30P5 (if available)

No data available for Orthologs for RPL30P5 Gene

Paralogs for RPL30P5 Gene

No data available for Paralogs for RPL30P5 Gene

Variants for RPL30P5 Gene

Additional Variant Information for RPL30P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL30P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL30P5 Gene

Disorders for RPL30P5 Gene

No disorders were found for RPL30P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL30P5 Gene

Publications for RPL30P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL30P5 Gene

Sources for RPL30P5 Gene

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