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Aliases for RPL30P3 Gene

Subcategory (RNA class) for RPL30P3 Gene

lncRNA

Aliases for RPL30P3 Gene

  • Ribosomal Protein L30 Pseudogene 3 2 3 5
  • RPL30_2_193 3

External Ids for RPL30P3 Gene

ORGUL Members for RPL30P3 Gene

Previous GeneCards Identifiers for RPL30P3 Gene

  • GC02U901642
  • GC02M009222

Summaries for RPL30P3 Gene

GeneCards Summary for RPL30P3 Gene

RPL30P3 (Ribosomal Protein L30 Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL30P3 Gene

Genomics for RPL30P3 Gene

Regulatory Elements for RPL30P3 Gene

Enhancers for RPL30P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G009099 1.1 Ensembl ENCODE 0.4 -17.7 -17678 0.9 HDGF PKNOX1 FOXA2 BMI1 CBX5 RELB IKZF2 CREM CBFB USF2 MBOAT2 ENSG00000261104 ENSG00000242136 RPL30P3
GH02G009095 1 Ensembl ENCODE 0.4 -14.2 -14181 1.1 CTCF THRB RAD21 TEAD3 RARA NR2F6 GATAD2A BHLHE40 NR2F2 TGIF2 ENSG00000261104 ENSG00000242136 RPL30P3
GH02G009070 0.9 ENCODE 0.4 +10.2 10212 2.4 TBP FOXA2 ZFP64 SIN3A RAD21 ZSCAN5C FOS ZNF263 NFYA CEBPB MBOAT2 ENSG00000261104 RPL30P3 HMGB1P25
GH02G009074 0.6 ENCODE 0.4 +6.7 6739 0.2 BHLHE40 TEAD4 MAX ATF2 JUND ATF3 BCL11A SCRT2 POU5F1 SP7 MBOAT2 RPL30P3 HMGB1P25
GH02G009071 0.6 ENCODE 0.4 +11.5 11494 0.0 TFAP4 THRB KAT8 ZGPAT KLF16 ZSCAN5C ZKSCAN8 ETV4 CREB1 RPL30P3 HMGB1P25
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL30P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL30P3 Gene

Chromosome:
2
Start:
9,081,393 bp from pter
End:
9,081,795 bp from pter
Size:
403 bases
Orientation:
Minus strand

Genomic View for RPL30P3 Gene

Genes around RPL30P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL30P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL30P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL30P3 Gene

Proteins for RPL30P3 Gene

Post-translational modifications for RPL30P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL30P3 Gene

Domains & Families for RPL30P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL30P3 Gene

Function for RPL30P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL30P3 Gene

Localization for RPL30P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL30P3 Gene

Pathways & Interactions for RPL30P3 Gene

SuperPathways for RPL30P3 Gene

No Data Available

Interacting Proteins for RPL30P3 Gene

Gene Ontology (GO) - Biological Process for RPL30P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL30P3 Gene

Drugs & Compounds for RPL30P3 Gene

No Compound Related Data Available

Transcripts for RPL30P3 Gene

mRNA/cDNA for RPL30P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL30P3 Gene

No ASD Table

Relevant External Links for RPL30P3 Gene

GeneLoc Exon Structure for
RPL30P3
ECgene alternative splicing isoforms for
RPL30P3

Expression for RPL30P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL30P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL30P3 Gene:

RPL30P3
genes like me logo Genes that share expression patterns with RPL30P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL30P3 Gene

Orthologs for RPL30P3 Gene

Evolution for RPL30P3 Gene

ENSEMBL:
Gene Tree for RPL30P3 (if available)
TreeFam:
Gene Tree for RPL30P3 (if available)

No data available for Orthologs for RPL30P3 Gene

Paralogs for RPL30P3 Gene

No data available for Paralogs for RPL30P3 Gene

Variants for RPL30P3 Gene

Relevant External Links for RPL30P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL30P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL30P3 Gene

Disorders for RPL30P3 Gene

Relevant External Links for RPL30P3

Genetic Association Database (GAD)
RPL30P3

No disorders were found for RPL30P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL30P3 Gene

Publications for RPL30P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis. (PMID: 19010793) Baranzini S.E. … Oksenberg J.R. (Hum. Mol. Genet. 2009) 46 64

Products for RPL30P3 Gene

Sources for RPL30P3 Gene

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