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Aliases for RPL30P11 Gene

Aliases for RPL30P11 Gene

  • Ribosomal Protein L30 Pseudogene 11 2 3 5
  • RPL30_6_1213 3

External Ids for RPL30P11 Gene

Previous GeneCards Identifiers for RPL30P11 Gene

  • GC12U901102
  • GC12M014510
  • GC12M014511

Summaries for RPL30P11 Gene

GeneCards Summary for RPL30P11 Gene

RPL30P11 (Ribosomal Protein L30 Pseudogene 11) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL30P11 Gene

Genomics for RPL30P11 Gene

Regulatory Elements for RPL30P11 Gene

Enhancers for RPL30P11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F014255 1.4 VISTA FANTOM5 Ensembl ENCODE 12.9 +106.5 106503 7.6 PKNOX1 ARNT CREB3L1 MLX ARID4B FEZF1 DMAP1 ZNF2 YY1 ZNF548 ATF7IP ENSG00000261324 HIST4H4 H2AFJ WBP11 RPL30P11 PLBD1 GC12P014255 GC12M014297 PIR56629
GH12F014251 0.4 ENCODE 12.5 +114.1 114053 0.8 BCOR ZMYM3 ZNF384 BMI1 YY1 MAFK ZBTB20 RFX1 ZNF362 TRIM22 ATF7IP RPL30P11 RNU6-491P GNAI2P1
GH12F014252 0.6 Ensembl 12.5 +112.6 112603 0.6 CHD4 ATF7IP RPL30P11 RNU6-491P GNAI2P1
GH12F014272 1.4 FANTOM5 Ensembl ENCODE 12.4 +91.8 91802 1.8 SRF ZNF202 HLF TAL1 ZNF121 OSR2 ZBTB33 WT1 TRIM28 ENSG00000261324 HIST4H4 ATF7IP RNU6-491P RPL30P11 WBP11 PLBD1 GC12P014255 PIR56629 GC12M014297
GH12F014383 1 Ensembl ENCODE 12.3 -20.4 -20409 5.8 HDGF PKNOX1 ATF1 DMAP1 ZNF2 YY1 ZNF207 KLF13 SP3 ZHX2 RPL30P11 ATF7IP RNU6-491P GC12P014389 GC12P014368
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL30P11 on UCSC Golden Path with GeneCards custom track

Promoters for RPL30P11 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000172340 -1297 4001 PKNOX1 ARNT CREB3L1 SIN3A ZNF2 YY1 CBX5 ZNF207 SP3 JUNB

Genomic Location for RPL30P11 Gene

Chromosome:
12
Start:
14,356,842 bp from pter
End:
14,365,503 bp from pter
Size:
8,662 bases
Orientation:
Minus strand

Genomic View for RPL30P11 Gene

Genes around RPL30P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL30P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL30P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL30P11 Gene

Proteins for RPL30P11 Gene

Post-translational modifications for RPL30P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL30P11 Gene

Domains & Families for RPL30P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL30P11 Gene

Function for RPL30P11 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL30P11 Gene

Localization for RPL30P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL30P11 Gene

Pathways & Interactions for RPL30P11 Gene

SuperPathways for RPL30P11 Gene

No Data Available

Interacting Proteins for RPL30P11 Gene

Gene Ontology (GO) - Biological Process for RPL30P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL30P11 Gene

Transcripts for RPL30P11 Gene

mRNA/cDNA for RPL30P11 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL30P11 Gene

No ASD Table

Relevant External Links for RPL30P11 Gene

GeneLoc Exon Structure for
RPL30P11
ECgene alternative splicing isoforms for
RPL30P11

Expression for RPL30P11 Gene

mRNA expression in normal human tissues for RPL30P11 Gene

mRNA differential expression in normal tissues according to GTEx for RPL30P11 Gene

This gene is overexpressed in Testis (x21.2) and Pituitary (x7.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL30P11 Gene:

RPL30P11
genes like me logo Genes that share expression patterns with RPL30P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL30P11 Gene

Orthologs for RPL30P11 Gene

Evolution for RPL30P11 Gene

ENSEMBL:
Gene Tree for RPL30P11 (if available)
TreeFam:
Gene Tree for RPL30P11 (if available)

No data available for Orthologs for RPL30P11 Gene

Paralogs for RPL30P11 Gene

No data available for Paralogs for RPL30P11 Gene

Variants for RPL30P11 Gene

Relevant External Links for RPL30P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL30P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL30P11 Gene

Disorders for RPL30P11 Gene

No disorders were found for RPL30P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL30P11 Gene

Publications for RPL30P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL30P11 Gene

Sources for RPL30P11 Gene

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