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Aliases for RPL30P10 Gene

Subcategory (RNA class) for RPL30P10 Gene

lncRNA

Aliases for RPL30P10 Gene

  • Ribosomal Protein L30 Pseudogene 10 2 3 5
  • RPL30_5_906 3

External Ids for RPL30P10 Gene

ORGUL Members for RPL30P10 Gene

Previous GeneCards Identifiers for RPL30P10 Gene

  • GC08U901158
  • GC08P058306

Summaries for RPL30P10 Gene

GeneCards Summary for RPL30P10 Gene

RPL30P10 (Ribosomal Protein L30 Pseudogene 10) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL30P10 Gene

Genomics for RPL30P10 Gene

Regulatory Elements for RPL30P10 Gene

Enhancers for RPL30P10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G057420 1.3 FANTOM5 Ensembl ENCODE 0.3 +28.3 28320 0.7 CTCF PKNOX1 FOXA2 RAD21 GATA2 FOXK2 CBX5 ZNF143 SMC3 ZSCAN29 RPL30P10 PIR59174
GH08G057398 0.6 FANTOM5 0.4 +6.5 6500 0.3 MTA2 CBFB RELA IKZF1 EED TCF7 RELB MYC IKZF2 RPL30P10 PIR59174
GH08G057402 0.5 FANTOM5 0.4 +9.7 9734 0.3 ZNF316 MAFG EMSY RPL30P10 PIR59174
GH08G057399 0.4 ENCODE 0.4 +6.0 6031 0.2 NFIC NFIB RPL30P10 PIR59174
GH08G057437 0.3 FANTOM5 0.3 +44.5 44512 0.0 PIR59174 RPL30P10
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL30P10 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL30P10 Gene

Chromosome:
8
Start:
57,392,546 bp from pter
End:
57,392,882 bp from pter
Size:
337 bases
Orientation:
Plus strand

Genomic View for RPL30P10 Gene

Genes around RPL30P10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL30P10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL30P10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL30P10 Gene

Proteins for RPL30P10 Gene

Post-translational modifications for RPL30P10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL30P10 Gene

Domains & Families for RPL30P10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL30P10 Gene

Function for RPL30P10 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL30P10 Gene

Localization for RPL30P10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL30P10 Gene

Pathways & Interactions for RPL30P10 Gene

SuperPathways for RPL30P10 Gene

No Data Available

Interacting Proteins for RPL30P10 Gene

Gene Ontology (GO) - Biological Process for RPL30P10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL30P10 Gene

Transcripts for RPL30P10 Gene

mRNA/cDNA for RPL30P10 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL30P10 Gene

No ASD Table

Relevant External Links for RPL30P10 Gene

GeneLoc Exon Structure for
RPL30P10
ECgene alternative splicing isoforms for
RPL30P10

Expression for RPL30P10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL30P10 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL30P10 Gene:

RPL30P10
genes like me logo Genes that share expression patterns with RPL30P10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL30P10 Gene

Orthologs for RPL30P10 Gene

Evolution for RPL30P10 Gene

ENSEMBL:
Gene Tree for RPL30P10 (if available)
TreeFam:
Gene Tree for RPL30P10 (if available)

No data available for Orthologs for RPL30P10 Gene

Paralogs for RPL30P10 Gene

No data available for Paralogs for RPL30P10 Gene

Variants for RPL30P10 Gene

Relevant External Links for RPL30P10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL30P10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL30P10 Gene

Disorders for RPL30P10 Gene

Relevant External Links for RPL30P10

Genetic Association Database (GAD)
RPL30P10

No disorders were found for RPL30P10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL30P10 Gene

Publications for RPL30P10 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. A genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder. (PMID: 20889312) Wang K.S. … Aragam N. (Schizophr. Res. 2010) 46 64
  3. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang S.J. … Fox C.S. (BMC Med. Genet. 2007) 46 64

Products for RPL30P10 Gene

Sources for RPL30P10 Gene

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