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Aliases for RPL29P6 Gene

Aliases for RPL29P6 Gene

  • Ribosomal Protein L29 Pseudogene 6 2 3
  • RP5-1057J7.1 5
  • RPL29_1_20 3

External Ids for RPL29P6 Gene

Previous GeneCards Identifiers for RPL29P6 Gene

  • GC01P023445
  • GC01P023572

Summaries for RPL29P6 Gene

GeneCards Summary for RPL29P6 Gene

RPL29P6 (Ribosomal Protein L29 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL29P6 Gene

Genomics for RPL29P6 Gene

Regulatory Elements for RPL29P6 Gene

Enhancers for RPL29P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G023244 0.6 FANTOM5 0.7 -0.2 -166 0.4 BCOR ZFHX2 EGR2 RPL29P6 HTR1D
GH01G023215 1.4 FANTOM5 Ensembl ENCODE 0.3 -27.8 -27815 2.0 RB1 FUS RAD21 ZNF335 GLIS2 SCRT2 EGR2 ZNF263 SMARCA5 SMARCC1 HTR1D RNU6-135P RNU6-514P TCEA3 LACTBL1 RPL29P6
GH01G023224 1 Ensembl ENCODE 0.4 -19.6 -19559 1.4 TBP CTCF PKNOX1 TAF1 MAX ZMYM3 FEZF1 GTF3C2 GLIS2 GATA3 ELOA RPL11 LINC01355 LACTBL1 ZBTB40-IT1 LUZP1 HTR1D RPL29P6
GH01G023193 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -48.5 -48544 6.3 HDGF PKNOX1 SIN3A GLIS2 ZNF143 FOS DEK MCM3 JUNB TSHZ1 LINC01355 ELOA-AS1 RNU6-135P RNU6-514P LUZP1 RPL11 HTR1D LACTBL1 RPL29P6
GH01G023210 0.7 ENCODE 0.3 -34.3 -34297 0.2 BCOR SMARCA5 CTCF PTBP1 MIER1 ZMYM3 NFXL1 RAD21 SMC3 KLF9 LUZP1 HTR1D RPL29P6
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL29P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL29P6 Gene

Chromosome:
1
Start:
23,244,729 bp from pter
End:
23,245,345 bp from pter
Size:
617 bases
Orientation:
Plus strand

Genomic View for RPL29P6 Gene

Genes around RPL29P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL29P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL29P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL29P6 Gene

Proteins for RPL29P6 Gene

Post-translational modifications for RPL29P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL29P6 Gene

Domains & Families for RPL29P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL29P6 Gene

Function for RPL29P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL29P6 Gene

Localization for RPL29P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL29P6 Gene

Pathways & Interactions for RPL29P6 Gene

SuperPathways for RPL29P6 Gene

No Data Available

Interacting Proteins for RPL29P6 Gene

Gene Ontology (GO) - Biological Process for RPL29P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL29P6 Gene

Drugs & Compounds for RPL29P6 Gene

No Compound Related Data Available

Transcripts for RPL29P6 Gene

mRNA/cDNA for RPL29P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL29P6 Gene

No ASD Table

Relevant External Links for RPL29P6 Gene

GeneLoc Exon Structure for
RPL29P6
ECgene alternative splicing isoforms for
RPL29P6

Expression for RPL29P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL29P6 Gene

mRNA differential expression in normal tissues according to GTEx for RPL29P6 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL29P6 Gene:

RPL29P6
genes like me logo Genes that share expression patterns with RPL29P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL29P6 Gene

Orthologs for RPL29P6 Gene

Evolution for RPL29P6 Gene

ENSEMBL:
Gene Tree for RPL29P6 (if available)
TreeFam:
Gene Tree for RPL29P6 (if available)

No data available for Orthologs for RPL29P6 Gene

Paralogs for RPL29P6 Gene

No data available for Paralogs for RPL29P6 Gene

Variants for RPL29P6 Gene

Relevant External Links for RPL29P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL29P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL29P6 Gene

Disorders for RPL29P6 Gene

Relevant External Links for RPL29P6

Genetic Association Database (GAD)
RPL29P6

No disorders were found for RPL29P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL29P6 Gene

Publications for RPL29P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 46 64
  3. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D. … Mitchell G.F. (BMC Med. Genet. 2007) 46 64
  4. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk J.B. … O'Connor G.T. (BMC Med. Genet. 2007) 46 64

Products for RPL29P6 Gene

Sources for RPL29P6 Gene

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