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Aliases for RPL29P20 Gene

Aliases for RPL29P20 Gene

  • Ribosomal Protein L29 Pseudogene 20 2 3
  • RPL29_10_1009 3
  • RP11-165N19.2 5

External Ids for RPL29P20 Gene

Previous GeneCards Identifiers for RPL29P20 Gene

  • GC09M113977
  • GC09M114936

Summaries for RPL29P20 Gene

GeneCards Summary for RPL29P20 Gene

RPL29P20 (Ribosomal Protein L29 Pseudogene 20) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL29P20 Gene

Genomics for RPL29P20 Gene

Regulatory Elements for RPL29P20 Gene

Enhancers for RPL29P20 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F112203 0.5 ENCODE 12.2 -29.8 -29802 1.3 ETV6 SUSD1 RPL29P20 PIR53089
GH09F112144 0.6 ENCODE 11.9 +28.0 27988 3.0 PKNOX1 ZNF121 ELK1 ZNF207 FOS REST NFIL3 MBD2 SREBF1 MIER3 RPL29P20 SUSD1 ZNF483 RNU6-855P GC09P112170
GH09F112140 0.2 ENCODE 11.9 +33.1 33098 0.7 RFX1 MTA2 JUNB TRIM22 TBX21 IKZF1 TARDBP STAT3 MLLT1 CREM RPL29P20 SUSD1 RNU6-855P GC09P112170
GH09F112193 1.1 Ensembl ENCODE 11.7 -20.7 -20688 1.8 PTRF ELK1 GATA2 SMARCA5 ZBTB11 CEBPB ELF1 HDAC8 CREB3 ZNF589 RPL29P20 SUSD1 PIR53089
GH09F112197 0.3 FANTOM5 11.7 -23.9 -23930 0.2 PKNOX1 SUSD1 RPL29P20 PIR53089
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL29P20 on UCSC Golden Path with GeneCards custom track

Promoters for RPL29P20 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001311775 -1087 1401 HDGF ARID4B ZNF48 GLIS2 KAT8 CREB3 SMARCA4 GLIS1 CTCF BRD4

Genomic Location for RPL29P20 Gene

Chromosome:
9
Start:
112,173,414 bp from pter
End:
112,174,013 bp from pter
Size:
600 bases
Orientation:
Minus strand

Genomic View for RPL29P20 Gene

Genes around RPL29P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL29P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL29P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL29P20 Gene

Proteins for RPL29P20 Gene

Post-translational modifications for RPL29P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL29P20 Gene

Domains & Families for RPL29P20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL29P20 Gene

Function for RPL29P20 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL29P20 Gene

Localization for RPL29P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL29P20 Gene

Pathways & Interactions for RPL29P20 Gene

SuperPathways for RPL29P20 Gene

No Data Available

Interacting Proteins for RPL29P20 Gene

Gene Ontology (GO) - Biological Process for RPL29P20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL29P20 Gene

Transcripts for RPL29P20 Gene

mRNA/cDNA for RPL29P20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL29P20 Gene

No ASD Table

Relevant External Links for RPL29P20 Gene

GeneLoc Exon Structure for
RPL29P20
ECgene alternative splicing isoforms for
RPL29P20

Expression for RPL29P20 Gene

mRNA expression in normal human tissues for RPL29P20 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL29P20 Gene:

RPL29P20
genes like me logo Genes that share expression patterns with RPL29P20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL29P20 Gene

Orthologs for RPL29P20 Gene

Evolution for RPL29P20 Gene

ENSEMBL:
Gene Tree for RPL29P20 (if available)
TreeFam:
Gene Tree for RPL29P20 (if available)

No data available for Orthologs for RPL29P20 Gene

Paralogs for RPL29P20 Gene

No data available for Paralogs for RPL29P20 Gene

Variants for RPL29P20 Gene

Relevant External Links for RPL29P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL29P20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL29P20 Gene

Disorders for RPL29P20 Gene

No disorders were found for RPL29P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL29P20 Gene

Publications for RPL29P20 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL29P20 Gene

Sources for RPL29P20 Gene

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