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Aliases for RPL29P16 Gene

Aliases for RPL29P16 Gene

  • Ribosomal Protein L29 Pseudogene 16 2 3
  • RPL29_9_696 3
  • AL109615.1 5

External Ids for RPL29P16 Gene

Previous GeneCards Identifiers for RPL29P16 Gene

  • GC06M044161
  • GC06M044057

Summaries for RPL29P16 Gene

GeneCards Summary for RPL29P16 Gene

RPL29P16 (Ribosomal Protein L29 Pseudogene 16) is a Pseudogene.

Additional gene information for RPL29P16 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL29P16 Gene

Genomics for RPL29P16 Gene

GeneHancer (GH) Regulatory Elements for RPL29P16 Gene

Promoters and enhancers for RPL29P16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I044094 Enhancer 0.9 ENCODE 0.4 -5.1 -5145 1.8 PKNOX1 FOXA2 MLX ARID4B DMAP1 ETS1 YY1 SLC30A9 RXRA SP5 MRPL14 TMEM63B CAPN11 VEGFA AARS2 SLC29A1 HSP90AB1 SLC35B2 NFKBIE TMEM151B
GH06I044096 Enhancer 0.9 ENCODE 0.4 -7.1 -7136 0.2 HDGF MLX ARID4B KLF17 SIN3A ZNF48 RAD21 RARA ARID2 ZNF143 CAPN11 TMEM63B MRPL14 VEGFA AARS2 SLC29A1 HSP90AB1 NFKBIE SLC35B2 TMEM151B
GH06I044104 Enhancer 0.8 ENCODE 0.4 -15.4 -15360 1.8 SMAD1 ZNF473 NFIB ZNF195 NCOA2 SCRT2 ZNF350 ZNF214 ZNF680 RXRA ZNF318 ENSG00000271970 ABCC10 AARS2 RPL34P14 POLR1C SLC35B2 XPO5 MRPL14 CUL9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL29P16 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL29P16 Gene

Genomic Locations for RPL29P16 Gene
chr6:44,089,125-44,089,763
(GRCh38/hg38)
Size:
639 bases
Orientation:
Minus strand
chr6:44,056,862-44,057,500
(GRCh37/hg19)

Genomic View for RPL29P16 Gene

Genes around RPL29P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL29P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL29P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL29P16 Gene

Proteins for RPL29P16 Gene

Post-translational modifications for RPL29P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL29P16 Gene

Domains & Families for RPL29P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL29P16 Gene

Function for RPL29P16 Gene

Phenotypes From GWAS Catalog for RPL29P16 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL29P16 Gene

Localization for RPL29P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL29P16 Gene

Pathways & Interactions for RPL29P16 Gene

SuperPathways for RPL29P16 Gene

No Data Available

Interacting Proteins for RPL29P16 Gene

Gene Ontology (GO) - Biological Process for RPL29P16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL29P16 Gene

Drugs & Compounds for RPL29P16 Gene

No Compound Related Data Available

Transcripts for RPL29P16 Gene

mRNA/cDNA for RPL29P16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL29P16 Gene

No ASD Table

Relevant External Links for RPL29P16 Gene

GeneLoc Exon Structure for
RPL29P16
ECgene alternative splicing isoforms for
RPL29P16

Expression for RPL29P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL29P16 Gene

mRNA differential expression in normal tissues according to GTEx for RPL29P16 Gene

This gene is overexpressed in Testis (x5.4) and Muscle - Skeletal (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of RPL29P16 Gene:

RPL29P16
genes like me logo Genes that share expression patterns with RPL29P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL29P16 Gene

Orthologs for RPL29P16 Gene

Evolution for RPL29P16 Gene

ENSEMBL:
Gene Tree for RPL29P16 (if available)
TreeFam:
Gene Tree for RPL29P16 (if available)

No data available for Orthologs for RPL29P16 Gene

Paralogs for RPL29P16 Gene

No data available for Paralogs for RPL29P16 Gene

Variants for RPL29P16 Gene

Additional Variant Information for RPL29P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL29P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL29P16 Gene

Disorders for RPL29P16 Gene

No disorders were found for RPL29P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL29P16 Gene

Publications for RPL29P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL29P16 Gene

Sources for RPL29P16 Gene

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