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Aliases for RPL29P1 Gene

Subcategory (RNA class) for RPL29P1 Gene

lncRNA

Aliases for RPL29P1 Gene

  • Ribosomal Protein L29 Pseudogene 1 2 3
  • RPL29P1 Ribosomal Protein L29 Pseudogene 1 3
  • RP3-336K20__B.2 5
  • RPL29_5_654 3
  • DJ336K20B.2 3

External Ids for RPL29P1 Gene

ORGUL Members for RPL29P1 Gene

Previous GeneCards Identifiers for RPL29P1 Gene

  • GC06U900279
  • GC06P007566
  • GC06P007567
  • GC06P007621

Summaries for RPL29P1 Gene

GeneCards Summary for RPL29P1 Gene

RPL29P1 (Ribosomal Protein L29 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL29P1 Gene

Genomics for RPL29P1 Gene

Regulatory Elements for RPL29P1 Gene

Enhancers for RPL29P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G007617 1.4 FANTOM5 Ensembl ENCODE 0.7 -1.9 -1910 1.3 PKNOX1 RAD21 RFX5 SCRT2 IKZF2 DEK EGR2 ZNF654 SMARCC1 USF2 SNRNP48 ENSG00000238221 RPL29P1
GH06G007615 1 Ensembl ENCODE 0.7 -4.5 -4538 0.6 CTCF FOXA2 CEBPG RAD21 RFX5 FOSL1 FOXK2 ZNF143 SMC3 MAFK ENSG00000238221 RPL29P1 SNRNP48
GH06G007589 1.1 ENCODE 0.3 -30.0 -30035 2.0 HNRNPUL1 PKNOX1 FOXA2 CREB3L1 AGO1 ZFP64 ARID4B SIN3A DMAP1 YY1 SNRNP48 SSR1 RIOK1 RPL29P1
GH06G007640 0.9 Ensembl ENCODE 0.3 +20.9 20857 1.6 CTCF FOXA2 BHLHE40 ZNF266 MNT NR3C1 PPARG FOSL1 JUND FOS GC06P007657 RPL29P1
GH06G007644 0.4 ENCODE 0.3 +24.3 24322 1.3 CEBPB NR3C1 SNRNP48 DSP ENSG00000232234 GC06P007657 RPL29P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL29P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL29P1 Gene

Chromosome:
6
Start:
7,620,422 bp from pter
End:
7,620,885 bp from pter
Size:
464 bases
Orientation:
Plus strand

Genomic View for RPL29P1 Gene

Genes around RPL29P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL29P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL29P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL29P1 Gene

Proteins for RPL29P1 Gene

Post-translational modifications for RPL29P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL29P1 Gene

Domains & Families for RPL29P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL29P1 Gene

Function for RPL29P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL29P1 Gene

Localization for RPL29P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL29P1 Gene

Pathways & Interactions for RPL29P1 Gene

SuperPathways for RPL29P1 Gene

No Data Available

Interacting Proteins for RPL29P1 Gene

Gene Ontology (GO) - Biological Process for RPL29P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL29P1 Gene

Drugs & Compounds for RPL29P1 Gene

No Compound Related Data Available

Transcripts for RPL29P1 Gene

mRNA/cDNA for RPL29P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL29P1 Gene

No ASD Table

Relevant External Links for RPL29P1 Gene

GeneLoc Exon Structure for
RPL29P1
ECgene alternative splicing isoforms for
RPL29P1

Expression for RPL29P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL29P1 Gene

mRNA differential expression in normal tissues according to GTEx for RPL29P1 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x5.1), Whole Blood (x4.6), and Brain - Cerebellum (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL29P1 Gene:

RPL29P1
genes like me logo Genes that share expression patterns with RPL29P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL29P1 Gene

Orthologs for RPL29P1 Gene

Evolution for RPL29P1 Gene

ENSEMBL:
Gene Tree for RPL29P1 (if available)
TreeFam:
Gene Tree for RPL29P1 (if available)

No data available for Orthologs for RPL29P1 Gene

Paralogs for RPL29P1 Gene

No data available for Paralogs for RPL29P1 Gene

Variants for RPL29P1 Gene

Relevant External Links for RPL29P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL29P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL29P1 Gene

Disorders for RPL29P1 Gene

Relevant External Links for RPL29P1

Genetic Association Database (GAD)
RPL29P1

No disorders were found for RPL29P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL29P1 Gene

Publications for RPL29P1 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Many sequence variants affecting diversity of adult human height. (PMID: 18391951) Gudbjartsson D.F. … Stefansson K. (Nat. Genet. 2008) 46 64

Products for RPL29P1 Gene

Sources for RPL29P1 Gene

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