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Aliases for RPL28P5 Gene

Aliases for RPL28P5 Gene

  • Ribosomal Protein L28 Pseudogene 5 2 3
  • RPL28_2_1625 3
  • AC012618.1 5

External Ids for RPL28P5 Gene

Previous GeneCards Identifiers for RPL28P5 Gene

  • GC19P012233
  • GC19P012371

Summaries for RPL28P5 Gene

GeneCards Summary for RPL28P5 Gene

RPL28P5 (Ribosomal Protein L28 Pseudogene 5) is a Pseudogene.

Additional gene information for RPL28P5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL28P5 Gene

Genomics for RPL28P5 Gene

Regulatory Elements for RPL28P5 Gene

Enhancers for RPL28P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H012609 1.7 FANTOM5 Ensembl ENCODE 10.7 +352.2 352235 4.8 HDGF PKNOX1 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF136 ZNF44 ZNF20 ZNF700 ZNF799 ZNF442 ZNF844 ZNF564 TRMT1 WDR83OS
GH19H012994 1.3 ENCODE dbSUPER 10.7 +736.8 736823 4.3 HDGF ARID4B SIN3A GLI4 ZNF2 SP3 YY2 SMARCA4 ZNF184 MXD3 ZNF20 TRMT1 ZNF136 ZNF44 ZNF799 ZNF490 ZNF433 ZNF442 RNASEH2A DCAF15
GH19H013042 1.3 FANTOM5 ENCODE dbSUPER 10.7 +783.8 783847 3 CEBPG ZIC2 ZNF324 ZFHX2 POLR2A SCRT2 PATZ1 ZNF600 ATF7 EGR2 TRMT1 ZNF20 ZNF490 LYL1 NACC1 RNASEH2A NFIX DAND5 GADD45GIP1 DCAF15
GH19H011343 1.2 ENCODE 10.7 -914.4 -914380 5 PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF766 ILF3 ZNF136 KRI1 ZNF627 ZNF844 ZNF44 TIMM29 ZNF20 ZNF763 ZNF433
GH19H012918 1.1 ENCODE 10.7 +659.7 659745 2.2 HDGF PKNOX1 ARNT SIN3A ZNF2 YY1 ZNF143 ZNF207 DEK SP3 ZNF136 CCDC130 ZNF791 ZNF442 ZNF564 ZNF844 TRMT1 ZNF763 ZNF44 ZNF20
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL28P5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL28P5 Gene

Genomic Locations for RPL28P5 Gene
chr19:12,260,126-12,260,582
(GRCh38/hg38)
Size:
457 bases
Orientation:
Plus strand
chr19:12,370,941-12,371,397
(GRCh37/hg19)

Genomic View for RPL28P5 Gene

Genes around RPL28P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL28P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL28P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL28P5 Gene

Proteins for RPL28P5 Gene

Post-translational modifications for RPL28P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL28P5 Gene

Domains & Families for RPL28P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL28P5 Gene

Function for RPL28P5 Gene

Phenotypes From GWAS Catalog for RPL28P5 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL28P5 Gene

Localization for RPL28P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL28P5 Gene

Pathways & Interactions for RPL28P5 Gene

SuperPathways for RPL28P5 Gene

No Data Available

Interacting Proteins for RPL28P5 Gene

Gene Ontology (GO) - Biological Process for RPL28P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL28P5 Gene

Drugs & Compounds for RPL28P5 Gene

No Compound Related Data Available

Transcripts for RPL28P5 Gene

mRNA/cDNA for RPL28P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL28P5 Gene

No ASD Table

Relevant External Links for RPL28P5 Gene

GeneLoc Exon Structure for
RPL28P5
ECgene alternative splicing isoforms for
RPL28P5

Expression for RPL28P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL28P5 Gene

mRNA differential expression in normal tissues according to GTEx for RPL28P5 Gene

This gene is overexpressed in Testis (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of RPL28P5 Gene:

RPL28P5
genes like me logo Genes that share expression patterns with RPL28P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL28P5 Gene

Orthologs for RPL28P5 Gene

Evolution for RPL28P5 Gene

ENSEMBL:
Gene Tree for RPL28P5 (if available)
TreeFam:
Gene Tree for RPL28P5 (if available)

No data available for Orthologs for RPL28P5 Gene

Paralogs for RPL28P5 Gene

No data available for Paralogs for RPL28P5 Gene

Variants for RPL28P5 Gene

Relevant External Links for RPL28P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL28P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL28P5 Gene

Disorders for RPL28P5 Gene

No disorders were found for RPL28P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL28P5 Gene

Publications for RPL28P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPL28P5 Gene

Sources for RPL28P5 Gene

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