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Aliases for RPL28P2 Gene

Subcategory (RNA class) for RPL28P2 Gene

antisense

Aliases for RPL28P2 Gene

  • Ribosomal Protein L28 Pseudogene 2 2 3
  • RP11-690I21.1 5
  • RPL28_1_335 3

External Ids for RPL28P2 Gene

ORGUL Members for RPL28P2 Gene

Previous GeneCards Identifiers for RPL28P2 Gene

  • GC02U901687
  • GC02M232655

Summaries for RPL28P2 Gene

GeneCards Summary for RPL28P2 Gene

RPL28P2 (Ribosomal Protein L28 Pseudogene 2) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL28P2 Gene

Genomics for RPL28P2 Gene

Regulatory Elements for RPL28P2 Gene

Enhancers for RPL28P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G232313 1.7 FANTOM5 Ensembl ENCODE dbSUPER 33.6 -525.8 -525768 3.9 ATF1 CBX3 PKNOX1 ZFP64 ZBTB40 GATA2 FOS CREM SMAD5 ZBTB11 RPL28P2 ENSG00000251485 SCARNA6 TEX44 ENSG00000261096 ECEL1P2 LOC730069 GC02P232173
GH02G230863 1.6 Ensembl ENCODE dbSUPER 21.9 +920.3 920276 11.3 PKNOX1 ARNT ARID4B DMAP1 ZNF143 SP3 ZHX2 REST ZNF662 TBX21 RPL28P2 ENSG00000230385 SPATA3 SPATA3-AS1 PSMD1 ITM2C LOC151484
GH02G231713 1.9 FANTOM5 Ensembl ENCODE dbSUPER 15.7 +74.1 74084 4.8 HDGF PKNOX1 FOXA2 MLX AGO1 ZFP64 WRNIP1 ARID4B SIN3A DMAP1 RPL28P2 PTMA NCL MIR1244-1 GC02M231725
GH02G231705 1.4 ENCODE dbSUPER 20.1 +80.8 80805 7.7 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 RPL28P2 COPS7B RNU2-22P GC02M231705 GC02P231712
GH02G232218 1.4 Ensembl ENCODE dbSUPER 19.5 -429.7 -429658 1.4 HDGF ZFP64 RAD21 GATA2 ZNF143 ETV6 CREM IKZF2 CBFB JUNB RPL28P2 ENSG00000251485 TEX44 ENSG00000261096 GC02P232173 LOC730069
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL28P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL28P2 Gene

Chromosome:
2
Start:
231,789,481 bp from pter
End:
231,789,887 bp from pter
Size:
407 bases
Orientation:
Minus strand

Genomic View for RPL28P2 Gene

Genes around RPL28P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL28P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL28P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL28P2 Gene

Proteins for RPL28P2 Gene

Post-translational modifications for RPL28P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL28P2 Gene

Domains & Families for RPL28P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL28P2 Gene

Function for RPL28P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL28P2 Gene

Localization for RPL28P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL28P2 Gene

Pathways & Interactions for RPL28P2 Gene

SuperPathways for RPL28P2 Gene

No Data Available

Interacting Proteins for RPL28P2 Gene

Gene Ontology (GO) - Biological Process for RPL28P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL28P2 Gene

Drugs & Compounds for RPL28P2 Gene

No Compound Related Data Available

Transcripts for RPL28P2 Gene

mRNA/cDNA for RPL28P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL28P2 Gene

No ASD Table

Relevant External Links for RPL28P2 Gene

GeneLoc Exon Structure for
RPL28P2
ECgene alternative splicing isoforms for
RPL28P2

Expression for RPL28P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL28P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL28P2 Gene:

RPL28P2
genes like me logo Genes that share expression patterns with RPL28P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL28P2 Gene

Orthologs for RPL28P2 Gene

Evolution for RPL28P2 Gene

ENSEMBL:
Gene Tree for RPL28P2 (if available)
TreeFam:
Gene Tree for RPL28P2 (if available)

No data available for Orthologs for RPL28P2 Gene

Paralogs for RPL28P2 Gene

No data available for Paralogs for RPL28P2 Gene

Variants for RPL28P2 Gene

Relevant External Links for RPL28P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL28P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL28P2 Gene

Disorders for RPL28P2 Gene

No disorders were found for RPL28P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL28P2 Gene

Publications for RPL28P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL28P2 Gene

Sources for RPL28P2 Gene

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