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Aliases for RPL28P2 Gene

Subcategory (RNA class) for RPL28P2 Gene

antisense

Aliases for RPL28P2 Gene

  • Ribosomal Protein L28 Pseudogene 2 2 3
  • RP11-690I21.1 5
  • RPL28_1_335 3

External Ids for RPL28P2 Gene

ORGUL Members for RPL28P2 Gene

Previous GeneCards Identifiers for RPL28P2 Gene

  • GC02U901687
  • GC02M232655

Summaries for RPL28P2 Gene

GeneCards Summary for RPL28P2 Gene

RPL28P2 (Ribosomal Protein L28 Pseudogene 2) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL28P2 Gene

Genomics for RPL28P2 Gene

Regulatory Elements for RPL28P2 Gene

Enhancers for RPL28P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F231785 1.2 ENCODE 46.7 +3.4 3418 1.9 HDGF PKNOX1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 RPL28P2 RPL23AP26 ENSG00000233538 LOC100289360 ENSG00000241409 EEF1B2P7 HTR2B PDE6D
GH02F232313 1.5 FANTOM5 Ensembl ENCODE 33.1 -529.3 -529268 10.9 ATF1 CBX3 PKNOX1 ZFP64 FEZF1 ZBTB40 RAD21 CREM MIXL1 SMAD5 RPL28P2 SCARNA6 ENSG00000251485 ENSG00000261096 ECEL1P2 EIF4E2 LOC730069 GC02P232173
GH02F231705 1.2 ENCODE 35.7 +80.8 80805 7.7 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 RPL23AP26 RPL28P2 ENSG00000233538 LOC100289360 HTR2B COPS7B RNU2-22P GC02M231705 GC02P231712
GH02F231298 1 Ensembl ENCODE 31.2 +489.7 489687 2.8 ZFP64 ZNF140 ZNF101 EED ZNF433 ZNF680 MTA2 ZBTB11 REST ZBTB8A RPL28P2 HTR2B SNORA75 SNORD20 SPATA3 SPATA3-AS1 ENSG00000261096 NCL GC02P231324 GC02P231264
GH02F231669 1.7 FANTOM5 Ensembl ENCODE 13.2 +116.7 116655 6.9 HDGF PKNOX1 WRNIP1 ZFP64 SIN3A YBX1 ZNF48 ETS1 GLIS2 ZNF143 RPL28P2 PTMA DIS3L2 GC02M231678 RN7SL499P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL28P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL28P2 Gene

Chromosome:
2
Start:
231,789,481 bp from pter
End:
231,789,887 bp from pter
Size:
407 bases
Orientation:
Minus strand

Genomic View for RPL28P2 Gene

Genes around RPL28P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL28P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL28P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL28P2 Gene

Proteins for RPL28P2 Gene

Post-translational modifications for RPL28P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL28P2 Gene

Domains & Families for RPL28P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL28P2 Gene

Function for RPL28P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL28P2 Gene

Localization for RPL28P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL28P2 Gene

Pathways & Interactions for RPL28P2 Gene

SuperPathways for RPL28P2 Gene

No Data Available

Interacting Proteins for RPL28P2 Gene

Gene Ontology (GO) - Biological Process for RPL28P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL28P2 Gene

Transcripts for RPL28P2 Gene

mRNA/cDNA for RPL28P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL28P2 Gene

No ASD Table

Relevant External Links for RPL28P2 Gene

GeneLoc Exon Structure for
RPL28P2
ECgene alternative splicing isoforms for
RPL28P2

Expression for RPL28P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL28P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL28P2 Gene:

RPL28P2
genes like me logo Genes that share expression patterns with RPL28P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL28P2 Gene

Orthologs for RPL28P2 Gene

Evolution for RPL28P2 Gene

ENSEMBL:
Gene Tree for RPL28P2 (if available)
TreeFam:
Gene Tree for RPL28P2 (if available)

No data available for Orthologs for RPL28P2 Gene

Paralogs for RPL28P2 Gene

No data available for Paralogs for RPL28P2 Gene

Variants for RPL28P2 Gene

Relevant External Links for RPL28P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL28P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL28P2 Gene

Disorders for RPL28P2 Gene

No disorders were found for RPL28P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL28P2 Gene

Publications for RPL28P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL28P2 Gene

Sources for RPL28P2 Gene

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