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Aliases for RPL27P9 Gene

Aliases for RPL27P9 Gene

  • Ribosomal Protein L27 Pseudogene 9 2 3
  • RP11-359I18.1 5
  • RPL27_4_375 3

External Ids for RPL27P9 Gene

Previous GeneCards Identifiers for RPL27P9 Gene

  • GC03U901244
  • GC03P058498
  • GC03P058593

Summaries for RPL27P9 Gene

GeneCards Summary for RPL27P9 Gene

RPL27P9 (Ribosomal Protein L27 Pseudogene 9) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL27P9 Gene

Genomics for RPL27P9 Gene

Regulatory Elements for RPL27P9 Gene

Enhancers for RPL27P9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F058518 1 ENCODE 0.4 +9.8 9768 5.8 PKNOX1 MLX ZFP64 ARID4B DMAP1 ZNF48 YY1 GATA2 SP5 NFYC PXK ENSG00000255154 RPP14 ENSG00000243384 FAM107A ACOX2 ENSG00000272360 ABHD6 RPL27P9
GH03F058495 0.9 Ensembl ENCODE 0.4 -14.5 -14532 2.0 RFX1 STAT1 PKNOX1 MTA2 IKZF1 JUNB BMI1 CREM TRIM28 ACOX2 PXK ENSG00000255154 RPP14 ENSG00000243384 FAM107A ENSG00000272360 ABHD6 KCTD6 RPL27P9
GH03F058532 1.2 Ensembl ENCODE 0.3 +21.6 21592 0.6 HDGF PKNOX1 WRNIP1 ZFP64 ARID4B DMAP1 ZNF48 ZNF2 YY1 GLIS2 ACOX2 RPL27P9
GH03F058525 1.1 Ensembl ENCODE 0.3 +15.2 15199 1.4 TBP SIN3A ARID4B ZBTB40 ZSCAN9 RAD21 FOS THAP11 ZNF263 SP5 PXK ENSG00000243384 FAM107A ACOX2 RPL27P9
GH03F058535 1.1 ENCODE 0.3 +26.0 25974 3.9 PKNOX1 ATF1 MLX ZFP64 ARID4B DMAP1 ZNF48 YY1 ZNF766 GATA2 ACOX2 RPL27P9
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL27P9 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL27P9 Gene

Chromosome:
3
Start:
58,511,310 bp from pter
End:
58,511,687 bp from pter
Size:
378 bases
Orientation:
Plus strand

Genomic View for RPL27P9 Gene

Genes around RPL27P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL27P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL27P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL27P9 Gene

Proteins for RPL27P9 Gene

Post-translational modifications for RPL27P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL27P9 Gene

Domains & Families for RPL27P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL27P9 Gene

Function for RPL27P9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL27P9 Gene

Localization for RPL27P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL27P9 Gene

Pathways & Interactions for RPL27P9 Gene

SuperPathways for RPL27P9 Gene

No Data Available

Interacting Proteins for RPL27P9 Gene

Gene Ontology (GO) - Biological Process for RPL27P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL27P9 Gene

Transcripts for RPL27P9 Gene

mRNA/cDNA for RPL27P9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL27P9 Gene

No ASD Table

Relevant External Links for RPL27P9 Gene

GeneLoc Exon Structure for
RPL27P9
ECgene alternative splicing isoforms for
RPL27P9

Expression for RPL27P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL27P9 Gene

mRNA differential expression in normal tissues according to GTEx for RPL27P9 Gene

This gene is overexpressed in Liver (x11.7).

NURSA nuclear receptor signaling pathways regulating expression of RPL27P9 Gene:

RPL27P9
genes like me logo Genes that share expression patterns with RPL27P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL27P9 Gene

Orthologs for RPL27P9 Gene

Evolution for RPL27P9 Gene

ENSEMBL:
Gene Tree for RPL27P9 (if available)
TreeFam:
Gene Tree for RPL27P9 (if available)

No data available for Orthologs for RPL27P9 Gene

Paralogs for RPL27P9 Gene

No data available for Paralogs for RPL27P9 Gene

Variants for RPL27P9 Gene

Relevant External Links for RPL27P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL27P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL27P9 Gene

Disorders for RPL27P9 Gene

No disorders were found for RPL27P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL27P9 Gene

Publications for RPL27P9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL27P9 Gene

Sources for RPL27P9 Gene

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