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Aliases for RPL27P12 Gene

Subcategory (RNA class) for RPL27P12 Gene

antisense

Aliases for RPL27P12 Gene

  • Ribosomal Protein L27 Pseudogene 12 2 3
  • RPL27_4_1293 3

External Ids for RPL27P12 Gene

ORGUL Members for RPL27P12 Gene

Previous GeneCards Identifiers for RPL27P12 Gene

  • GC12U901092
  • GC12M124206

Summaries for RPL27P12 Gene

GeneCards Summary for RPL27P12 Gene

RPL27P12 (Ribosomal Protein L27 Pseudogene 12) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RPL27P12 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL27P12 Gene

Genomics for RPL27P12 Gene

GeneHancer (GH) Regulatory Elements for RPL27P12 Gene

Promoters and enhancers for RPL27P12 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I123718 Enhancer 1.1 ENCODE dbSUPER 550.8 +1.7 1726 2 PKNOX1 ATF1 ARNT TCF12 ZNF766 GATA2 ATF7 KDM4B NCOA1 ZNF592 RPL27P12 TCTN2 DNAH10 MPHOSPH9 CCDC92 LOC105370042 ATP6V0A2
GH12I123722 Enhancer 0.2 dbSUPER 550.8 -1.2 -1155 1.3 LOC105370042 RPL27P12 TCTN2 LOC101927415 ATP6V0A2
GH12I123711 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.2 8204 4.7 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZBTB7B POLR2B ZNF143 ZNF263 ATP6V0A2 TCTN2 DDX55 DNAH10 EIF2B1 C12orf65 KMT5A ENSG00000270130 LOC101927415 RPL27P12
GH12I123723 Enhancer 0.6 dbSUPER 0.8 -2.3 -2297 0.7 CBFB JUNB BATF ATF2 BCL11A ETV6 RUNX3 SPI1 LOC105370042 TCTN2 MPHOSPH9 LOC101927415 RPL27P12 ATP6V0A2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL27P12 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL27P12 Gene

Genomic Locations for RPL27P12 Gene
chr12:123,721,218-123,721,642
(GRCh38/hg38)
Size:
425 bases
Orientation:
Minus strand
chr12:124,205,765-124,206,189
(GRCh37/hg19)

Genomic View for RPL27P12 Gene

Genes around RPL27P12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL27P12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL27P12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL27P12 Gene

Proteins for RPL27P12 Gene

Post-translational modifications for RPL27P12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL27P12 Gene

Domains & Families for RPL27P12 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL27P12 Gene

Function for RPL27P12 Gene

Phenotypes From GWAS Catalog for RPL27P12 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL27P12 Gene

Localization for RPL27P12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL27P12 Gene

Pathways & Interactions for RPL27P12 Gene

SuperPathways for RPL27P12 Gene

No Data Available

Interacting Proteins for RPL27P12 Gene

Gene Ontology (GO) - Biological Process for RPL27P12 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL27P12 Gene

Drugs & Compounds for RPL27P12 Gene

No Compound Related Data Available

Transcripts for RPL27P12 Gene

mRNA/cDNA for RPL27P12 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL27P12 Gene

No ASD Table

Relevant External Links for RPL27P12 Gene

GeneLoc Exon Structure for
RPL27P12
ECgene alternative splicing isoforms for
RPL27P12

Expression for RPL27P12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL27P12 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL27P12 Gene:

RPL27P12
genes like me logo Genes that share expression patterns with RPL27P12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL27P12 Gene

Orthologs for RPL27P12 Gene

Evolution for RPL27P12 Gene

ENSEMBL:
Gene Tree for RPL27P12 (if available)
TreeFam:
Gene Tree for RPL27P12 (if available)

No data available for Orthologs for RPL27P12 Gene

Paralogs for RPL27P12 Gene

No data available for Paralogs for RPL27P12 Gene

Variants for RPL27P12 Gene

Additional Variant Information for RPL27P12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL27P12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL27P12 Gene

Disorders for RPL27P12 Gene

No disorders were found for RPL27P12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL27P12 Gene

Publications for RPL27P12 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL27P12 Gene

Sources for RPL27P12 Gene

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