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Aliases for RPL27P11 Gene

Aliases for RPL27P11 Gene

  • Ribosomal Protein L27 Pseudogene 11 2 3
  • RPL27_6_845 3
  • AC009362.2 5

External Ids for RPL27P11 Gene

Previous GeneCards Identifiers for RPL27P11 Gene

  • GC07P130579
  • GC07P130928

Summaries for RPL27P11 Gene

GeneCards Summary for RPL27P11 Gene

RPL27P11 (Ribosomal Protein L27 Pseudogene 11) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL27P11 Gene

Genomics for RPL27P11 Gene

Regulatory Elements for RPL27P11 Gene

Enhancers for RPL27P11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G131243 1.2 Ensembl ENCODE dbSUPER 0.7 +1.9 1932 1.1 ATF1 HDAC6 JUN RAD21 FOSL1 ZNF366 KDM5B FOS CREM TCF7L2 LINC-PINT MKLN1 MKLN1-AS RPL27P11 GC07M131248
GH07G131234 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.8 -5810 4.9 FOXA2 ATF1 ARID4B SIN3A BRCA1 YY1 FOS MIER2 MEF2D NFIL3 MKLN1 LINC-PINT RPL27P11 GC07M131204
GH07G131225 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -16.4 -16358 2.2 HDGF ATF1 FOXA2 ARNT ARID4B SIN3A BRCA1 YY1 SLC30A9 GATA2 MKLN1 RPL27P11 GC07M131204
GH07G131230 1.5 Ensembl ENCODE dbSUPER 0.4 -11.0 -10965 1.9 HDGF PKNOX1 FOXA2 ATF1 MLX ARID4B SIN3A DMAP1 YY1 ZNF766 MKLN1 LINC-PINT RPL27P11 GC07M131204
GH07G131248 1.3 Ensembl ENCODE dbSUPER 0.4 +6.8 6829 1.8 GTF2F1 MXI1 ZBTB21 JUN MAX SIN3A RAD21 ZKSCAN1 HIC1 POLR2A MKLN1-AS MKLN1 LINC-PINT COPG2 RPL27P11 GC07M131248
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL27P11 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL27P11 Gene

Chromosome:
7
Start:
131,242,555 bp from pter
End:
131,243,044 bp from pter
Size:
490 bases
Orientation:
Plus strand

Genomic View for RPL27P11 Gene

Genes around RPL27P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL27P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL27P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL27P11 Gene

Proteins for RPL27P11 Gene

Post-translational modifications for RPL27P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL27P11 Gene

Domains & Families for RPL27P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL27P11 Gene

Function for RPL27P11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL27P11 Gene

Localization for RPL27P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL27P11 Gene

Pathways & Interactions for RPL27P11 Gene

SuperPathways for RPL27P11 Gene

No Data Available

Interacting Proteins for RPL27P11 Gene

Gene Ontology (GO) - Biological Process for RPL27P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL27P11 Gene

Drugs & Compounds for RPL27P11 Gene

No Compound Related Data Available

Transcripts for RPL27P11 Gene

mRNA/cDNA for RPL27P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL27P11 Gene

No ASD Table

Relevant External Links for RPL27P11 Gene

GeneLoc Exon Structure for
RPL27P11
ECgene alternative splicing isoforms for
RPL27P11

Expression for RPL27P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL27P11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL27P11 Gene:

RPL27P11
genes like me logo Genes that share expression patterns with RPL27P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL27P11 Gene

Orthologs for RPL27P11 Gene

Evolution for RPL27P11 Gene

ENSEMBL:
Gene Tree for RPL27P11 (if available)
TreeFam:
Gene Tree for RPL27P11 (if available)

No data available for Orthologs for RPL27P11 Gene

Paralogs for RPL27P11 Gene

No data available for Paralogs for RPL27P11 Gene

Variants for RPL27P11 Gene

Relevant External Links for RPL27P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL27P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL27P11 Gene

Disorders for RPL27P11 Gene

No disorders were found for RPL27P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL27P11 Gene

Publications for RPL27P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL27P11 Gene

Sources for RPL27P11 Gene

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