Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL27AP3 Gene

Subcategory (RNA class) for RPL27AP3 Gene

lncRNA

Aliases for RPL27AP3 Gene

  • Ribosomal Protein L27a Pseudogene 3 2 3
  • RPL27A_1_302 3
  • AC104076.2 5

External Ids for RPL27AP3 Gene

ORGUL Members for RPL27AP3 Gene

Previous GeneCards Identifiers for RPL27AP3 Gene

  • GC02U901633
  • GC02M181804

Summaries for RPL27AP3 Gene

GeneCards Summary for RPL27AP3 Gene

RPL27AP3 (Ribosomal Protein L27a Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL27AP3 Gene

Genomics for RPL27AP3 Gene

Regulatory Elements for RPL27AP3 Gene

Enhancers for RPL27AP3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G180937 0.7 ENCODE 0.7 +1.6 1610 0.2 PKNOX1 BHLHE40 IRF5 JUNB TBX21 ZNF507 TARDBP NBN IRF1 RELB UBE2E3 RPL27AP3 FTH1P20
GH02G180911 0.3 FANTOM5 0.3 +28.0 27975 0.1 RPL27AP3 FTH1P20
GH02G180875 0.4 FANTOM5 0.2 +64.1 64133 0.3 SP7 FTH1P20 RPL27AP3
GH02G180884 0.3 FANTOM5 0.2 +54.8 54795 0.3 FTH1P20 RPL27AP3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL27AP3 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL27AP3 Gene

Chromosome:
2
Start:
180,938,830 bp from pter
End:
180,939,298 bp from pter
Size:
469 bases
Orientation:
Minus strand

Genomic View for RPL27AP3 Gene

Genes around RPL27AP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL27AP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL27AP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL27AP3 Gene

Proteins for RPL27AP3 Gene

Post-translational modifications for RPL27AP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL27AP3 Gene

Domains & Families for RPL27AP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL27AP3 Gene

Function for RPL27AP3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL27AP3 Gene

Localization for RPL27AP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL27AP3 Gene

Pathways & Interactions for RPL27AP3 Gene

SuperPathways for RPL27AP3 Gene

No Data Available

Interacting Proteins for RPL27AP3 Gene

Gene Ontology (GO) - Biological Process for RPL27AP3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL27AP3 Gene

Drugs & Compounds for RPL27AP3 Gene

No Compound Related Data Available

Transcripts for RPL27AP3 Gene

mRNA/cDNA for RPL27AP3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL27AP3 Gene

No ASD Table

Relevant External Links for RPL27AP3 Gene

GeneLoc Exon Structure for
RPL27AP3
ECgene alternative splicing isoforms for
RPL27AP3

Expression for RPL27AP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL27AP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL27AP3 Gene:

RPL27AP3
genes like me logo Genes that share expression patterns with RPL27AP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL27AP3 Gene

Orthologs for RPL27AP3 Gene

Evolution for RPL27AP3 Gene

ENSEMBL:
Gene Tree for RPL27AP3 (if available)
TreeFam:
Gene Tree for RPL27AP3 (if available)

No data available for Orthologs for RPL27AP3 Gene

Paralogs for RPL27AP3 Gene

No data available for Paralogs for RPL27AP3 Gene

Variants for RPL27AP3 Gene

Relevant External Links for RPL27AP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL27AP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL27AP3 Gene

Disorders for RPL27AP3 Gene

No disorders were found for RPL27AP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL27AP3 Gene

Publications for RPL27AP3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL27AP3 Gene

Sources for RPL27AP3 Gene

Content
Loading form....