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Aliases for RPL27AP2 Gene

Aliases for RPL27AP2 Gene

  • Ribosomal Protein L27a Pseudogene 2 2 3
  • RP11-226L15.1 5
  • RPL27A_1_106 3
  • HCG2041321 3

External Ids for RPL27AP2 Gene

Previous GeneCards Identifiers for RPL27AP2 Gene

  • GC01P158254

Summaries for RPL27AP2 Gene

GeneCards Summary for RPL27AP2 Gene

RPL27AP2 (Ribosomal Protein L27a Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL27AP2 Gene

Genomics for RPL27AP2 Gene

Regulatory Elements for RPL27AP2 Gene

Enhancers for RPL27AP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G160635 1.8 FANTOM5 Ensembl ENCODE dbSUPER 5.6 +624.0 623983 12.5 HDGF PKNOX1 ARNT WRNIP1 YBX1 ZNF766 GATA2 CBX5 ZNF143 ZNF207 ENSG00000228863 SLAMF1 RPL27AP2 SETP9 PPOX SLAMF6 CD48 CD84
GH01G159991 1.1 FANTOM5 Ensembl 0.3 -26.2 -26217 0.4 KLF1 PKNOX1 TAF1 MAX CEBPG RAD21 YY1 STAT1 RNF2 NFYC SLAMF8 SLAMF9 FCRL6P1 RPL27AP2
GH01G160006 0.7 ENCODE 0.4 -11.5 -11524 0.1 CTCF ZNF654 ZNF362 RB1 TRIM22 REST RAD21 KLF16 SMC3 ZNF143 ATP1A4 RPL27AP2 FCRL6P1
GH01G159996 0.6 Ensembl ENCODE 0.3 -21.1 -21147 0.5 JUND ENSG00000260766 FCRL6P1 RPL27AP2
GH01G160003 0.4 ENCODE 0.4 -13.4 -13432 2.9 ZNF362 GLIS1 ENSG00000260766 RPL27AP2 FCRL6P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL27AP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL27AP2 Gene

Chromosome:
1
Start:
160,018,009 bp from pter
End:
160,020,784 bp from pter
Size:
2,776 bases
Orientation:
Plus strand

Genomic View for RPL27AP2 Gene

Genes around RPL27AP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL27AP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL27AP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL27AP2 Gene

Proteins for RPL27AP2 Gene

Post-translational modifications for RPL27AP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL27AP2 Gene

Domains & Families for RPL27AP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL27AP2 Gene

Function for RPL27AP2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL27AP2 Gene

Localization for RPL27AP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL27AP2 Gene

Pathways & Interactions for RPL27AP2 Gene

SuperPathways for RPL27AP2 Gene

No Data Available

Interacting Proteins for RPL27AP2 Gene

Gene Ontology (GO) - Biological Process for RPL27AP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL27AP2 Gene

Drugs & Compounds for RPL27AP2 Gene

No Compound Related Data Available

Transcripts for RPL27AP2 Gene

mRNA/cDNA for RPL27AP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL27AP2 Gene

No ASD Table

Relevant External Links for RPL27AP2 Gene

GeneLoc Exon Structure for
RPL27AP2
ECgene alternative splicing isoforms for
RPL27AP2

Expression for RPL27AP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL27AP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL27AP2 Gene:

RPL27AP2
genes like me logo Genes that share expression patterns with RPL27AP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL27AP2 Gene

Orthologs for RPL27AP2 Gene

Evolution for RPL27AP2 Gene

ENSEMBL:
Gene Tree for RPL27AP2 (if available)
TreeFam:
Gene Tree for RPL27AP2 (if available)

No data available for Orthologs for RPL27AP2 Gene

Paralogs for RPL27AP2 Gene

No data available for Paralogs for RPL27AP2 Gene

Variants for RPL27AP2 Gene

Relevant External Links for RPL27AP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL27AP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL27AP2 Gene

Disorders for RPL27AP2 Gene

No disorders were found for RPL27AP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL27AP2 Gene

Publications for RPL27AP2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for RPL27AP2 Gene

Sources for RPL27AP2 Gene

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