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Aliases for RPL27AP Gene

Aliases for RPL27AP Gene

  • Ribosomal Protein L27a Pseudogene 2 3
  • DJ1028D15.2 3

External Ids for RPL27AP Gene

Previous GeneCards Identifiers for RPL27AP Gene

  • GC20U990082
  • GC20P041969
  • GC20P042919
  • GC20P042966
  • GC20P041714
  • GC20P042282
  • GC20P039016

Summaries for RPL27AP Gene

GeneCards Summary for RPL27AP Gene

RPL27AP (Ribosomal Protein L27a Pseudogene) is a Pseudogene.

Additional gene information for RPL27AP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL27AP Gene

Genomics for RPL27AP Gene

GeneHancer (GH) Regulatory Elements for RPL27AP Gene

Promoters and enhancers for RPL27AP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I043652 Enhancer 0.9 ENCODE 550.8 +0.5 541 0.9 MLX ARID4B DMAP1 ZNF48 ETS1 YY1 SLC30A9 RXRA MXD4 PPARG RPL27AP MYBL2 IFT52 SGK2 GC20P043655 GC20M043632
GH20I043653 Enhancer 0.3 ENCODE 550.8 +1.6 1606 0.5 SCRT2 GC20P043655 RPL27AP IFT52 SGK2 GC20M043632
GH20I043589 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.2 -61.7 -61708 2 HDGF PKNOX1 CLOCK ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B IFT52 ENSG00000282876 MYBL2 SRSF6 GC20P043584 RPL27AP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL27AP on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL27AP Gene

Genomic Locations for RPL27AP Gene
chr20:43,652,508-43,653,340
(GRCh38/hg38)
Size:
833 bases
Orientation:
Plus strand
chr20:42,281,148-42,281,980
(GRCh37/hg19)

Genomic View for RPL27AP Gene

Genes around RPL27AP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL27AP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL27AP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL27AP Gene

Proteins for RPL27AP Gene

Post-translational modifications for RPL27AP Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL27AP Gene

Domains & Families for RPL27AP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL27AP Gene

Function for RPL27AP Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL27AP Gene

Localization for RPL27AP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL27AP Gene

Pathways & Interactions for RPL27AP Gene

SuperPathways for RPL27AP Gene

No Data Available

Interacting Proteins for RPL27AP Gene

Gene Ontology (GO) - Biological Process for RPL27AP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL27AP Gene

Drugs & Compounds for RPL27AP Gene

No Compound Related Data Available

Transcripts for RPL27AP Gene

mRNA/cDNA for RPL27AP Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL27AP Gene

No ASD Table

Relevant External Links for RPL27AP Gene

GeneLoc Exon Structure for
RPL27AP
ECgene alternative splicing isoforms for
RPL27AP

Expression for RPL27AP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL27AP Gene

mRNA differential expression in normal tissues according to GTEx for RPL27AP Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x14.4) and Brain - Cerebellum (x11.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL27AP Gene:

RPL27AP
genes like me logo Genes that share expression patterns with RPL27AP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL27AP Gene

Orthologs for RPL27AP Gene

Evolution for RPL27AP Gene

ENSEMBL:
Gene Tree for RPL27AP (if available)
TreeFam:
Gene Tree for RPL27AP (if available)

No data available for Orthologs for RPL27AP Gene

Paralogs for RPL27AP Gene

No data available for Paralogs for RPL27AP Gene

Variants for RPL27AP Gene

Additional Variant Information for RPL27AP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL27AP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL27AP Gene

Disorders for RPL27AP Gene

No disorders were found for RPL27AP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL27AP Gene

Publications for RPL27AP Gene

No publications were found for RPL27AP Gene.

Products for RPL27AP Gene

Sources for RPL27AP Gene

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