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Aliases for RPL27AP Gene

Aliases for RPL27AP Gene

  • Ribosomal Protein L27a Pseudogene 2 3 5
  • DJ1028D15.2 3

External Ids for RPL27AP Gene

Previous GeneCards Identifiers for RPL27AP Gene

  • GC20U990082
  • GC20P041969
  • GC20P042919
  • GC20P042966
  • GC20P041714
  • GC20P042282
  • GC20P039016

Summaries for RPL27AP Gene

GeneCards Summary for RPL27AP Gene

RPL27AP (Ribosomal Protein L27a Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL27AP Gene

Genomics for RPL27AP Gene

Regulatory Elements for RPL27AP Gene

Enhancers for RPL27AP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20F043456 2.2 ENCODE 15.1 -194.3 -194292 3.4 PKNOX1 CREB3L1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ENSG00000237555 LOC101927138 LINC01728 RPL27AP IFT52 SRSF6 GC20P043474
GH20F044206 1.2 ENCODE 15 +557.4 557382 6.1 HDGF PKNOX1 MLX WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 OSER1 OSER1-AS1 LINC01728 ENSG00000237555 RPL27AP FITM2 IFT52 JPH2
GH20F043652 1 ENCODE 0.8 +0.5 541 0.9 ATF1 MLX ARID4B DMAP1 ZNF48 SLC30A9 MXD4 PPARG KAT8 MIER3 MYBL2 IFT52 SGK2 GC20P043655 RPL27AP
GH20F043653 0.5 ENCODE 0.8 +1.6 1607 0.5 SCRT2 ZMYM3 IRF1 IFT52 SGK2 GC20P043655 RPL27AP
GH20F043589 1.1 ENCODE 0.2 -61.7 -61709 2.0 HDGF PKNOX1 ARNT WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 IFT52 MYBL2 OSER1 RPL27AP
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL27AP on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL27AP Gene

Chromosome:
20
Start:
43,652,508 bp from pter
End:
43,653,340 bp from pter
Size:
833 bases
Orientation:
Plus strand

Genomic View for RPL27AP Gene

Genes around RPL27AP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL27AP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL27AP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL27AP Gene

Proteins for RPL27AP Gene

Post-translational modifications for RPL27AP Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL27AP Gene

Domains & Families for RPL27AP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL27AP Gene

Function for RPL27AP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL27AP Gene

Localization for RPL27AP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL27AP Gene

Pathways & Interactions for RPL27AP Gene

SuperPathways for RPL27AP Gene

No Data Available

Interacting Proteins for RPL27AP Gene

Gene Ontology (GO) - Biological Process for RPL27AP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL27AP Gene

Transcripts for RPL27AP Gene

mRNA/cDNA for RPL27AP Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL27AP Gene

No ASD Table

Relevant External Links for RPL27AP Gene

GeneLoc Exon Structure for
RPL27AP
ECgene alternative splicing isoforms for
RPL27AP

Expression for RPL27AP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL27AP Gene

mRNA differential expression in normal tissues according to GTEx for RPL27AP Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x14.4) and Brain - Cerebellum (x11.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL27AP Gene:

RPL27AP
genes like me logo Genes that share expression patterns with RPL27AP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL27AP Gene

Orthologs for RPL27AP Gene

Evolution for RPL27AP Gene

ENSEMBL:
Gene Tree for RPL27AP (if available)
TreeFam:
Gene Tree for RPL27AP (if available)

No data available for Orthologs for RPL27AP Gene

Paralogs for RPL27AP Gene

No data available for Paralogs for RPL27AP Gene

Variants for RPL27AP Gene

Relevant External Links for RPL27AP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL27AP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL27AP Gene

Disorders for RPL27AP Gene

No disorders were found for RPL27AP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL27AP Gene

Publications for RPL27AP Gene

No publications were found for RPL27AP Gene.

Products for RPL27AP Gene

Sources for RPL27AP Gene

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