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Aliases for RPL26L1 Gene

Aliases for RPL26L1 Gene

  • Ribosomal Protein L26 Like 1 2 3 5
  • Ribosomal Protein L26 Pseudogene 1 2 3
  • RPL26P1 3 4
  • Ribosomal Protein L26 Homolog 3
  • Ribosomal Protein L26-Like 1 2

External Ids for RPL26L1 Gene

Previous HGNC Symbols for RPL26L1 Gene

  • RPL26P1

Previous GeneCards Identifiers for RPL26L1 Gene

  • GC05P172643
  • GC05P173088
  • GC05P172316
  • GC05P172367
  • GC05P172319
  • GC05P167481
  • GC05P172385

Summaries for RPL26L1 Gene

Entrez Gene Summary for RPL26L1 Gene

  • This gene encodes a protein that shares high sequence similarity with ribosomal protein L26. Alternative splicing results in multiple transcript variants encoding the same protein. [provided by RefSeq, Dec 2015]

GeneCards Summary for RPL26L1 Gene

RPL26L1 (Ribosomal Protein L26 Like 1) is a Protein Coding gene. Among its related pathways are Gene Expression and Metabolism. GO annotations related to this gene include structural constituent of ribosome. An important paralog of this gene is RPL26.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL26L1 Gene

Genomics for RPL26L1 Gene

Regulatory Elements for RPL26L1 Gene

Genomic Location for RPL26L1 Gene

Chromosome:
5
Start:
172,954,294 bp from pter
End:
172,969,771 bp from pter
Size:
15,478 bases
Orientation:
Plus strand

Genomic View for RPL26L1 Gene

Genes around RPL26L1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL26L1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL26L1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL26L1 Gene

Proteins for RPL26L1 Gene

  • Protein details for RPL26L1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9UNX3-RL26L_HUMAN
    Recommended name:
    60S ribosomal protein L26-like 1
    Protein Accession:
    Q9UNX3
    Secondary Accessions:
    • B3KY82
    • D3DQM0

    Protein attributes for RPL26L1 Gene

    Size:
    145 amino acids
    Molecular mass:
    17256 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RPL26L1 Gene

Proteomics data for RPL26L1 Gene at MOPED

Post-translational modifications for RPL26L1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Antibody Products

No data available for DME Specific Peptides for RPL26L1 Gene

Domains & Families for RPL26L1 Gene

Gene Families for RPL26L1 Gene

Suggested Antigen Peptide Sequences for RPL26L1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9UNX3

UniProtKB/Swiss-Prot:

RL26L_HUMAN :
  • Belongs to the ribosomal protein L24P family.
Family:
  • Belongs to the ribosomal protein L24P family.
genes like me logo Genes that share domains with RPL26L1: view

Function for RPL26L1 Gene

Phenotypes for RPL26L1 Gene

genes like me logo Genes that share phenotypes with RPL26L1: view

Animal Model Products

miRNA for RPL26L1 Gene

miRTarBase miRNAs that target RPL26L1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RPL26L1 Gene

Localization for RPL26L1 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RPL26L1 Gene COMPARTMENTS Subcellular localization image for RPL26L1 gene
Compartment Confidence
cytosol 5
extracellular 5
nucleus 3
mitochondrion 1

Gene Ontology (GO) - Cellular Components for RPL26L1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005829 cytosol TAS --
GO:0005840 ribosome IEA --
genes like me logo Genes that share ontologies with RPL26L1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for RPL26L1 Gene

Pathways & Interactions for RPL26L1 Gene

genes like me logo Genes that share pathways with RPL26L1: view

Pathways by source for RPL26L1 Gene

1 KEGG pathway for RPL26L1 Gene

Gene Ontology (GO) - Biological Process for RPL26L1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0002181 cytoplasmic translation IBA --
GO:0006364 rRNA processing TAS --
GO:0006413 translational initiation TAS --
GO:0006415 translational termination TAS --
GO:0006614 SRP-dependent cotranslational protein targeting to membrane TAS --
genes like me logo Genes that share ontologies with RPL26L1: view

No data available for SIGNOR curated interactions for RPL26L1 Gene

Drugs & Compounds for RPL26L1 Gene

(3) Drugs for RPL26L1 Gene - From: DrugBank

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Alpha-Hydroxy-Beta-Phenyl-Propionic Acid Experimental Pharma Target 0
anisomycin Experimental Pharma Target JNK, SAPK and p38 activator 0
puromycin Experimental Pharma Target 0
genes like me logo Genes that share compounds with RPL26L1: view

Transcripts for RPL26L1 Gene

Unigene Clusters for RPL26L1 Gene

Ribosomal protein L26-like 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPL26L1 Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3 ^ 4a · 4b
SP1: -
SP2:

Relevant External Links for RPL26L1 Gene

GeneLoc Exon Structure for
RPL26L1
ECgene alternative splicing isoforms for
RPL26L1

Expression for RPL26L1 Gene

mRNA expression in normal human tissues for RPL26L1 Gene

Protein differential expression in normal tissues from HIPED for RPL26L1 Gene

This gene is overexpressed in Bone (12.6), Lung (8.9), Cervix (8.7), and Tlymphocyte (6.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for RPL26L1 Gene



SOURCE GeneReport for Unigene cluster for RPL26L1 Gene Hs.546390

genes like me logo Genes that share expression patterns with RPL26L1: view

Protein tissue co-expression partners for RPL26L1 Gene

- Elite partner

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for RPL26L1 Gene

Orthologs for RPL26L1 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for RPL26L1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RPL26L1 35
  • 99.54 (n)
  • 100 (a)
rat
(Rattus norvegicus)
Mammalia LOC100910721 35
  • 81.61 (n)
  • 91.72 (a)
cow
(Bos Taurus)
Mammalia RPL26L1 36
  • 95 (a)
OneToOne
dog
(Canis familiaris)
Mammalia RPL26 36
  • 99 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia RPL26L1 36
  • 87 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RPL26L1 36
  • 76 (a)
OneToOne
chicken
(Gallus gallus)
Aves RPL26L1 35
  • 82.99 (n)
  • 98.62 (a)
zebrafish
(Danio rerio)
Actinopterygii Dr.26956 35
rpl26 36
  • 94 (a)
OneToMany
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.8648 35
fruit fly
(Drosophila melanogaster)
Insecta CG6846 37
  • 71 (a)
RpL26 36
  • 70 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea rpl-26 37
  • 61 (a)
rpl-26 36
  • 61 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes RPL26A 36
  • 52 (a)
ManyToMany
RPL26B 36
  • 52 (a)
ManyToMany
barley
(Hordeum vulgare)
Liliopsida Hv.12406 35
rice
(Oryza sativa)
Liliopsida Os.9317 35
corn
(Zea mays)
Liliopsida Zm.6748 35
sea squirt
(Ciona savignyi)
Ascidiacea CSA.11213 36
  • 74 (a)
ManyToMany
CSA.11213 36
  • 74 (a)
ManyToMany
Species with no ortholog for RPL26L1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for RPL26L1 Gene

ENSEMBL:
Gene Tree for RPL26L1 (if available)
TreeFam:
Gene Tree for RPL26L1 (if available)

Paralogs for RPL26L1 Gene

Paralogs for RPL26L1 Gene

(2) SIMAP similar genes for RPL26L1 Gene using alignment to 3 proteins:

Pseudogenes.org Pseudogenes for RPL26L1 Gene

genes like me logo Genes that share paralogs with RPL26L1: view

Variants for RPL26L1 Gene

Sequence variations from dbSNP and Humsavar for RPL26L1 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs505788 -- 172,969,391(+) AAAGA(C/T)CTGTT intron-variant
rs522058 -- 172,953,687(+) GTGTT(C/T)ATTGC upstream-variant-2KB
rs525703 -- 172,954,088(+) CAAAC(C/G)TGTTT upstream-variant-2KB
rs475936 -- 172,968,405(+) TCCTC(A/T)TTATG intron-variant
rs1458332 -- 172,963,690(+) TCTTC(A/G)TAGCA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RPL26L1 Gene

Variant ID Type Subtype PubMed ID
nsv830555 CNV Loss 17160897
nsv883115 CNV Loss 21882294

Variation tolerance for RPL26L1 Gene

Residual Variation Intolerance Score: 71.3% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.45; 28.32% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for RPL26L1 Gene

HapMap Linkage Disequilibrium report
RPL26L1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RPL26L1 Gene

Disorders for RPL26L1 Gene

Relevant External Links for RPL26L1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPL26L1

No disorders were found for RPL26L1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL26L1 Gene

Publications for RPL26L1 Gene

  1. Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells. (PMID: 11042152) Zhang Q.-H. … Chen Z. (Genome Res. 2000) 2 3 4 67
  2. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3
  3. Panorama of ancient metazoan macromolecular complexes. (PMID: 26344197) Wan C. … Emili A. (Nature 2015) 3
  4. TIMMDC1/C3orf1 functions as a membrane-embedded mitochondrial complex I assembly factor through association with the MCIA complex. (PMID: 24344204) Guarani V. … Harper J.W. (Mol. Cell. Biol. 2014) 3
  5. Probing nuclear pore complex architecture with proximity-dependent biotinylation. (PMID: 24927568) Kim D.I. … Roux K.J. (Proc. Natl. Acad. Sci. U.S.A. 2014) 3

Products for RPL26L1 Gene

Sources for RPL26L1 Gene

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