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Aliases for RPL23P8 Gene

Aliases for RPL23P8 Gene

  • Ribosomal Protein L23 Pseudogene 8 2 3 5
  • RPL23_4_790 3

External Ids for RPL23P8 Gene

Previous GeneCards Identifiers for RPL23P8 Gene

  • GC07U902599
  • GC17M037004
  • GC07P020866
  • GC07P020752

Summaries for RPL23P8 Gene

GeneCards Summary for RPL23P8 Gene

RPL23P8 (Ribosomal Protein L23 Pseudogene 8) is a Pseudogene.

Additional gene information for RPL23P8 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23P8 Gene

Genomics for RPL23P8 Gene

Regulatory Elements for RPL23P8 Gene

Enhancers for RPL23P8 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H020513 0.8 ENCODE 11.6 -312.8 -312842 0 PKNOX1 NFIB INSM2 FEZF1 ZNF366 ZSCAN5C ZNF350 RCOR1 ZNF174 OVOL3 RPL23P8 EEF1A1P27 GC07P020414
GH07H020835 0.7 ENCODE 0.4 +8.1 8121 0 HDAC1 CTCF PKNOX1 ZBTB40 E2F1 MTA3 CTBP1 POLR2A SMAD5 L3MBTL2 LINC01162 RPL23P8
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL23P8 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23P8 Gene

Chromosome:
7
Start:
20,827,298 bp from pter
End:
20,827,820 bp from pter
Size:
523 bases
Orientation:
Plus strand

Genomic View for RPL23P8 Gene

Genes around RPL23P8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23P8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23P8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23P8 Gene

Proteins for RPL23P8 Gene

Post-translational modifications for RPL23P8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23P8 Gene

Domains & Families for RPL23P8 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23P8 Gene

Function for RPL23P8 Gene

Phenotypes From GWAS Catalog for RPL23P8 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL23P8
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23P8 Gene

Localization for RPL23P8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23P8 Gene

Pathways & Interactions for RPL23P8 Gene

SuperPathways for RPL23P8 Gene

No Data Available

Interacting Proteins for RPL23P8 Gene

Gene Ontology (GO) - Biological Process for RPL23P8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23P8 Gene

Drugs & Compounds for RPL23P8 Gene

No Compound Related Data Available

Transcripts for RPL23P8 Gene

mRNA/cDNA for RPL23P8 Gene

(1) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPL23P8 Gene

Ribosomal protein L23 pseudogene 8:
Representative Sequences:

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL23P8
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23P8 Gene

No ASD Table

Relevant External Links for RPL23P8 Gene

GeneLoc Exon Structure for
RPL23P8
ECgene alternative splicing isoforms for
RPL23P8

Expression for RPL23P8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23P8 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23P8 Gene:

RPL23P8

SOURCE GeneReport for Unigene cluster for RPL23P8 Gene:

Hs.722187
genes like me logo Genes that share expression patterns with RPL23P8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23P8 Gene

Orthologs for RPL23P8 Gene

Evolution for RPL23P8 Gene

ENSEMBL:
Gene Tree for RPL23P8 (if available)
TreeFam:
Gene Tree for RPL23P8 (if available)

No data available for Orthologs for RPL23P8 Gene

Paralogs for RPL23P8 Gene

No data available for Paralogs for RPL23P8 Gene

Variants for RPL23P8 Gene

Sequence variations from dbSNP and Humsavar for RPL23P8 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1001147804 -- 20,826,718(+) CCAGG(A/C)CAACC upstream-variant-2KB
rs1001603500 -- 20,827,468(+) GGGAC(G/T)GCTGA nc-transcript-variant
rs1001730071 -- 20,826,541(+) AGGAA(G/T)CTTTT upstream-variant-2KB
rs1002028127 -- 20,825,668(+) AAATT(C/T)TTGCC upstream-variant-2KB
rs1002060572 -- 20,825,398(+) ACCCC(A/G)TCTCT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for RPL23P8 Gene

Variant ID Type Subtype PubMed ID
nsv1030726 CNV gain 25217958

Relevant External Links for RPL23P8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23P8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPL23P8 Gene

Disorders for RPL23P8 Gene

Relevant External Links for RPL23P8

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPL23P8

No disorders were found for RPL23P8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL23P8 Gene

Publications for RPL23P8 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array. (PMID: 23535732) Eeles RA … Easton DF (Nature genetics 2013) 3 60

Products for RPL23P8 Gene

Sources for RPL23P8 Gene

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