Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL23P6 Gene

Aliases for RPL23P6 Gene

  • Ribosomal Protein L23 Pseudogene 6 2 3
  • RPL23_1_689 3
  • FO393411.1 5

External Ids for RPL23P6 Gene

Previous GeneCards Identifiers for RPL23P6 Gene

  • GC06M040037
  • GC06M039927

Summaries for RPL23P6 Gene

GeneCards Summary for RPL23P6 Gene

RPL23P6 (Ribosomal Protein L23 Pseudogene 6) is a Pseudogene.

Additional gene information for RPL23P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23P6 Gene

Genomics for RPL23P6 Gene

GeneHancer (GH) Regulatory Elements for RPL23P6 Gene

Promoters and enhancers for RPL23P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I039862 Enhancer 0.6 dbSUPER 15.1 +94.5 94514 3.1 ELF3 CTCF ZNF654 RB1 TRIM22 REST RAD21 ATF2 KLF16 IKZF1 MOCS1 RPL23P6 LOC100505635 ENSG00000281969 DAAM2
GH06I039497 Enhancer 0.5 ENCODE 5.1 +461.7 461689 0.1 FOXA2 MAX HNF4A REST RAD21 NR2F2 YY1 RPL23P6 GC06M039549 E2F4P1 KIF6
GH06I039981 Enhancer 0.8 FANTOM5 0.3 -22.5 -22463 0 ZNF2 RAD21 ZNF766 ZNF143 ZNF362 ZNF654 CEBPB REST ZNF148 CEBPA MOCS1 DAAM2 TUBBP9 RPL23P6
GH06I039982 Enhancer 0.8 Ensembl 0.3 -22.2 -22242 0.2 CTCF BACH1 ZNF384 CEBPG ZNF2 ZNF644 RAD21 FOSL1 CC2D1A ZNF766 TUBBP9 RPL23P6
GH06I039965 Enhancer 0.2 ENCODE 0.4 -6.8 -6822 1.3 LOC100505635 RPL23P6 TUBBP9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL23P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23P6 Gene

Genomic Locations for RPL23P6 Gene
chr6:39,958,351-39,958,859
(GRCh38/hg38)
Size:
509 bases
Orientation:
Minus strand
chr6:39,926,090-39,926,598
(GRCh37/hg19)

Genomic View for RPL23P6 Gene

Genes around RPL23P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23P6 Gene

Proteins for RPL23P6 Gene

Post-translational modifications for RPL23P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23P6 Gene

Domains & Families for RPL23P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23P6 Gene

Function for RPL23P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23P6 Gene

Localization for RPL23P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23P6 Gene

Pathways & Interactions for RPL23P6 Gene

SuperPathways for RPL23P6 Gene

No Data Available

Interacting Proteins for RPL23P6 Gene

Gene Ontology (GO) - Biological Process for RPL23P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23P6 Gene

Drugs & Compounds for RPL23P6 Gene

No Compound Related Data Available

Transcripts for RPL23P6 Gene

mRNA/cDNA for RPL23P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23P6 Gene

No ASD Table

Relevant External Links for RPL23P6 Gene

GeneLoc Exon Structure for
RPL23P6
ECgene alternative splicing isoforms for
RPL23P6

Expression for RPL23P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23P6 Gene:

RPL23P6
genes like me logo Genes that share expression patterns with RPL23P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23P6 Gene

Orthologs for RPL23P6 Gene

Evolution for RPL23P6 Gene

ENSEMBL:
Gene Tree for RPL23P6 (if available)
TreeFam:
Gene Tree for RPL23P6 (if available)

No data available for Orthologs for RPL23P6 Gene

Paralogs for RPL23P6 Gene

No data available for Paralogs for RPL23P6 Gene

Variants for RPL23P6 Gene

Additional Variant Information for RPL23P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23P6 Gene

Disorders for RPL23P6 Gene

Additional Disease Information for RPL23P6

Genetic Association Database
(GAD)

No disorders were found for RPL23P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL23P6 Gene

Publications for RPL23P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 44 58
  3. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 44 58

Products for RPL23P6 Gene

Sources for RPL23P6 Gene

Content
Loading form....