Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL23P6 Gene

Aliases for RPL23P6 Gene

  • Ribosomal Protein L23 Pseudogene 6 2 3
  • RP1-278E11.3 5
  • RPL23_1_689 3

External Ids for RPL23P6 Gene

Previous GeneCards Identifiers for RPL23P6 Gene

  • GC06M040037
  • GC06M039927

Summaries for RPL23P6 Gene

GeneCards Summary for RPL23P6 Gene

RPL23P6 (Ribosomal Protein L23 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23P6 Gene

Genomics for RPL23P6 Gene

Regulatory Elements for RPL23P6 Gene

Enhancers for RPL23P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F039114 1.2 ENCODE 10.6 +843.8 843785 2.1 HDGF PKNOX1 ARNT CREB3L1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 ANKRD18EP KCNK17 RPL23P6 GLP1R GC06M039468 PIR35108 SAYSD1
GH06F039497 0.5 ENCODE 5.1 +461.7 461690 0.1 RAD21 NR2F2 YY1 RPL23P6 GC06M039447 E2F4P1
GH06F039965 0.7 ENCODE 0.4 -6.8 -6823 1.3 DMAP1 ZIC2 ZNF335 FOSL1 ZNF121 ZNF263 ZBTB10 ZBTB11 USF2 CEBPB LOC100505635 RPL23P6 TUBBP9
GH06F039981 0.8 FANTOM5 0.3 -22.5 -22463 0.0 CTCF ZNF175 ZNF384 CEBPG ZNF644 ZNF2 RAD21 ZNF316 SMC3 NFE2 MOCS1 DAAM2 TUBBP9 RPL23P6
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL23P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23P6 Gene

Chromosome:
6
Start:
39,958,351 bp from pter
End:
39,958,859 bp from pter
Size:
509 bases
Orientation:
Minus strand

Genomic View for RPL23P6 Gene

Genes around RPL23P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23P6 Gene

Proteins for RPL23P6 Gene

Post-translational modifications for RPL23P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23P6 Gene

Domains & Families for RPL23P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23P6 Gene

Function for RPL23P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23P6 Gene

Localization for RPL23P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23P6 Gene

Pathways & Interactions for RPL23P6 Gene

SuperPathways for RPL23P6 Gene

No Data Available

Interacting Proteins for RPL23P6 Gene

Gene Ontology (GO) - Biological Process for RPL23P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23P6 Gene

Transcripts for RPL23P6 Gene

mRNA/cDNA for RPL23P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23P6 Gene

No ASD Table

Relevant External Links for RPL23P6 Gene

GeneLoc Exon Structure for
RPL23P6
ECgene alternative splicing isoforms for
RPL23P6

Expression for RPL23P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL23P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23P6 Gene:

RPL23P6
genes like me logo Genes that share expression patterns with RPL23P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL23P6 Gene

Orthologs for RPL23P6 Gene

Evolution for RPL23P6 Gene

ENSEMBL:
Gene Tree for RPL23P6 (if available)
TreeFam:
Gene Tree for RPL23P6 (if available)

No data available for Orthologs for RPL23P6 Gene

Paralogs for RPL23P6 Gene

No data available for Paralogs for RPL23P6 Gene

Variants for RPL23P6 Gene

Relevant External Links for RPL23P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23P6 Gene

Disorders for RPL23P6 Gene

Relevant External Links for RPL23P6

Genetic Association Database (GAD)
RPL23P6

No disorders were found for RPL23P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL23P6 Gene

Publications for RPL23P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox C.S. … Atwood L.D. (BMC Med. Genet. 2007) 46 64
  3. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 46 64

Products for RPL23P6 Gene

Sources for RPL23P6 Gene

Content
Loading form....