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Aliases for RPL23P4 Gene

Subcategory (RNA class) for RPL23P4 Gene

lncRNA

Aliases for RPL23P4 Gene

  • Ribosomal Protein L23 Pseudogene 4 2 3 5
  • RPL23_2_327 3

External Ids for RPL23P4 Gene

ORGUL Members for RPL23P4 Gene

Previous GeneCards Identifiers for RPL23P4 Gene

  • GC02U901624
  • GC02P220564

Summaries for RPL23P4 Gene

GeneCards Summary for RPL23P4 Gene

RPL23P4 (Ribosomal Protein L23 Pseudogene 4) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23P4 Gene

Genomics for RPL23P4 Gene

Regulatory Elements for RPL23P4 Gene

Enhancers for RPL23P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G219683 1.2 ENCODE dbSUPER 0.4 -10.1 -10124 7.4 PKNOX1 ATF1 ARID4B SIN3A ZNF143 ZNF263 SP3 CAVIN1 GTF2B NFYC OBSL1 TMEM198 CHPF ENSG00000228973 SLC4A3 DNPEP DNAJB2 ATG9A LOC105373886 RPL23P4
GH02G219702 0.8 ENCODE dbSUPER 0.4 +5.2 5153 1.8 PKNOX1 CEBPA HLF CEBPB STK11IP RPL23P4 LOC105373887
GH02G219722 1 ENCODE dbSUPER 0.3 +24.7 24695 0.3 PKNOX1 ESRRA NFIB SIN3A RARA E2F1 CTBP1 GATA3 FOS NR2F6 LOC105373887 RPL23P4
GH02G219724 0.8 dbSUPER 0.3 +26.8 26835 1.2 HDAC1 FOXA2 ATF1 TCF12 CREM CEBPB NFIC SMARCA4 CEBPA NR2C1 LOC105373887 RPL23P4
GH02G219692 0.5 FANTOM5 dbSUPER 0.4 -5.1 -5067 0.1 RPL23P4 LOC105373886
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL23P4 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23P4 Gene

Chromosome:
2
Start:
219,697,799 bp from pter
End:
219,698,214 bp from pter
Size:
416 bases
Orientation:
Plus strand

Genomic View for RPL23P4 Gene

Genes around RPL23P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23P4 Gene

Proteins for RPL23P4 Gene

Post-translational modifications for RPL23P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23P4 Gene

Domains & Families for RPL23P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23P4 Gene

Function for RPL23P4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23P4 Gene

Localization for RPL23P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23P4 Gene

Pathways & Interactions for RPL23P4 Gene

SuperPathways for RPL23P4 Gene

No Data Available

Interacting Proteins for RPL23P4 Gene

Gene Ontology (GO) - Biological Process for RPL23P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23P4 Gene

Drugs & Compounds for RPL23P4 Gene

No Compound Related Data Available

Transcripts for RPL23P4 Gene

mRNA/cDNA for RPL23P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23P4 Gene

No ASD Table

Relevant External Links for RPL23P4 Gene

GeneLoc Exon Structure for
RPL23P4
ECgene alternative splicing isoforms for
RPL23P4

Expression for RPL23P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23P4 Gene:

RPL23P4
genes like me logo Genes that share expression patterns with RPL23P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23P4 Gene

Orthologs for RPL23P4 Gene

Evolution for RPL23P4 Gene

ENSEMBL:
Gene Tree for RPL23P4 (if available)
TreeFam:
Gene Tree for RPL23P4 (if available)

No data available for Orthologs for RPL23P4 Gene

Paralogs for RPL23P4 Gene

No data available for Paralogs for RPL23P4 Gene

Variants for RPL23P4 Gene

Relevant External Links for RPL23P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23P4 Gene

Disorders for RPL23P4 Gene

Relevant External Links for RPL23P4

Genetic Association Database (GAD)
RPL23P4

No disorders were found for RPL23P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL23P4 Gene

Publications for RPL23P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang S.J. … Fox C.S. (BMC Med. Genet. 2007) 46 64
  3. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q. … O'Donnell C.J. (BMC Med. Genet. 2007) 46 64
  4. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 46 64
  5. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 46 64

Products for RPL23P4 Gene

Sources for RPL23P4 Gene

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