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Aliases for RPL23P2 Gene

Aliases for RPL23P2 Gene

  • Ribosomal Protein L23 Pseudogene 2 2 3 5
  • 60S Ribosomal Protein L23 Pseudogene 2 3
  • RPL23_4_1724 3

External Ids for RPL23P2 Gene

Previous GeneCards Identifiers for RPL23P2 Gene

  • GC21M026948
  • GC21M029291
  • GC21M030370
  • GC21M015774

Summaries for RPL23P2 Gene

GeneCards Summary for RPL23P2 Gene

RPL23P2 (Ribosomal Protein L23 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23P2 Gene

Genomics for RPL23P2 Gene

Regulatory Elements for RPL23P2 Gene

Enhancers for RPL23P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21G029346 1.4 Ensembl ENCODE dbSUPER 13.3 -351.5 -351492 6.3 PKNOX1 FOXA2 TBL1XR1 NFIB WRNIP1 THRB RAD21 SCRT2 ZNF350 ZNF143 ENSG00000224649 RPL23P2 BACH1-IT2 BACH1-AS1 LINC00189 MAP3K7CL LTN1 BACH1-IT1 GC21P029329 GC21P029330
GH21G029257 1.6 FANTOM5 Ensembl ENCODE dbSUPER 9.9 -262.4 -262405 5.4 ELF3 TBP MLX ZNF133 FEZF1 RAD21 RFX5 GATA2 SCRT2 SMARCC2 RPL23P2 GC21P029286 GAPDHP14
GH21G029298 1.4 ENCODE dbSUPER 10.5 -302.8 -302777 5.8 CREB3L1 ZFP64 DMAP1 YY1 ZNF263 SP3 TBX21 ZFP41 SSRP1 GLIS1 ENSG00000231125 LTN1 RPL12P9 RPL23P2 LOC105369299 GC21P029306 GC21P029305
GH21G029021 1.1 ENCODE 11.1 -26.2 -26155 4.7 HDGF PKNOX1 CREB3L1 ARNT WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 CCT8 RPL12P9 LTN1 RWDD2B N6AMT1 RPL23P2 BACH1-IT1 LINC01697 BACH1-IT2 USP16
GH21G029002 1.9 FANTOM5 Ensembl ENCODE 0.7 -5.0 -4988 1.9 HDGF PKNOX1 MLX CREB3L1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 CCT8 RWDD2B RPL12P9 LTN1 USP16 N6AMT1 GC21P029003 RPL23P2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL23P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23P2 Gene

Chromosome:
21
Start:
28,997,556 bp from pter
End:
28,998,070 bp from pter
Size:
515 bases
Orientation:
Minus strand

Genomic View for RPL23P2 Gene

Genes around RPL23P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23P2 Gene

Proteins for RPL23P2 Gene

Post-translational modifications for RPL23P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23P2 Gene

Domains & Families for RPL23P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23P2 Gene

Function for RPL23P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23P2 Gene

Localization for RPL23P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23P2 Gene

Pathways & Interactions for RPL23P2 Gene

SuperPathways for RPL23P2 Gene

No Data Available

Interacting Proteins for RPL23P2 Gene

Gene Ontology (GO) - Biological Process for RPL23P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23P2 Gene

Drugs & Compounds for RPL23P2 Gene

No Compound Related Data Available

Transcripts for RPL23P2 Gene

mRNA/cDNA for RPL23P2 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23P2 Gene

No ASD Table

Relevant External Links for RPL23P2 Gene

GeneLoc Exon Structure for
RPL23P2
ECgene alternative splicing isoforms for
RPL23P2

Expression for RPL23P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23P2 Gene:

RPL23P2
genes like me logo Genes that share expression patterns with RPL23P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23P2 Gene

Orthologs for RPL23P2 Gene

Evolution for RPL23P2 Gene

ENSEMBL:
Gene Tree for RPL23P2 (if available)
TreeFam:
Gene Tree for RPL23P2 (if available)

No data available for Orthologs for RPL23P2 Gene

Paralogs for RPL23P2 Gene

No data available for Paralogs for RPL23P2 Gene

Variants for RPL23P2 Gene

Relevant External Links for RPL23P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23P2 Gene

Disorders for RPL23P2 Gene

No disorders were found for RPL23P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23P2 Gene

Publications for RPL23P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M. … Yaspo M.-L. (Nature 2000) 3 64

Products for RPL23P2 Gene

Sources for RPL23P2 Gene

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