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Aliases for RPL23P2 Gene

Aliases for RPL23P2 Gene

  • Ribosomal Protein L23 Pseudogene 2 2 3 5
  • 60S Ribosomal Protein L23 Pseudogene 2 3
  • RPL23_4_1724 3

External Ids for RPL23P2 Gene

Previous GeneCards Identifiers for RPL23P2 Gene

  • GC21M026948
  • GC21M029291
  • GC21M030370
  • GC21M015774

Summaries for RPL23P2 Gene

GeneCards Summary for RPL23P2 Gene

RPL23P2 (Ribosomal Protein L23 Pseudogene 2) is a Pseudogene.

Additional gene information for RPL23P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23P2 Gene

Genomics for RPL23P2 Gene

Regulatory Elements for RPL23P2 Gene

Enhancers for RPL23P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21H029216 2 FANTOM5 Ensembl ENCODE dbSUPER 42 -221.9 -221882 7 PKNOX1 FOXA2 FEZF1 ZNF2 ZNF302 FOS DEK SP3 REST ZNF662 LTN1 USP16 ENSG00000231125 RPL23P2 RPL12P9 BACH1 N6AMT1 HSPD1P7 ENSG00000259981 LINC00307
GH21H029298 1.4 ENCODE dbSUPER 45.7 -302.8 -302777 5 HDGF ARNT ZFP64 ARID4B SIN3A DMAP1 YY1 ZNF766 FOS SP3 ENSG00000231125 LTN1 RPL23P2 USP16 RPL12P9 GC21P029306 LOC105369299 GC21P029305
GH21H029346 1.4 Ensembl ENCODE dbSUPER 22.2 -351.5 -351492 6 FOXA2 TBL1XR1 NFIB THRB RAD21 SCRT2 ZNF350 ZNF143 ZNF207 ATF7 RPL23P2 LTN1 ENSG00000224649 ENSG00000231125 USP16 BACH1-IT2 BACH1-AS1 RPL12P9 LINC00189 MAP3K7CL
GH21H028991 1.2 ENCODE 23.2 +5.3 5253 2 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 USP16 CCT8 LTN1 RWDD2B RPL23P2 N6AMT1 RPL12P9 ENSG00000231125 ENSG00000273254 MAP3K7CL
GH21H029155 1.7 FANTOM5 Ensembl ENCODE dbSUPER 12.9 -157.7 -157680 1 HDAC1 ATF1 EGR1 ZNF366 ZSCAN5C ATF7 CREM SP3 ZNF174 ZEB2 BACH1 ENSG00000231125 USP16 RPL23P2 LTN1 RPL12P9 CCT8 MAP3K7CL GC21M029140 ENSG00000201984
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL23P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23P2 Gene

Chromosome:
21
Start:
28,997,556 bp from pter
End:
28,998,070 bp from pter
Size:
515 bases
Orientation:
Minus strand

Genomic View for RPL23P2 Gene

Genes around RPL23P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23P2 Gene

Proteins for RPL23P2 Gene

Post-translational modifications for RPL23P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23P2 Gene

Domains & Families for RPL23P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23P2 Gene

Function for RPL23P2 Gene

Phenotypes From GWAS Catalog for RPL23P2 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL23P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23P2 Gene

Localization for RPL23P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23P2 Gene

Pathways & Interactions for RPL23P2 Gene

SuperPathways for RPL23P2 Gene

No Data Available

Interacting Proteins for RPL23P2 Gene

Gene Ontology (GO) - Biological Process for RPL23P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23P2 Gene

Drugs & Compounds for RPL23P2 Gene

No Compound Related Data Available

Transcripts for RPL23P2 Gene

mRNA/cDNA for RPL23P2 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL23P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23P2 Gene

No ASD Table

Relevant External Links for RPL23P2 Gene

GeneLoc Exon Structure for
RPL23P2
ECgene alternative splicing isoforms for
RPL23P2

Expression for RPL23P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23P2 Gene:

RPL23P2
genes like me logo Genes that share expression patterns with RPL23P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23P2 Gene

Orthologs for RPL23P2 Gene

Evolution for RPL23P2 Gene

ENSEMBL:
Gene Tree for RPL23P2 (if available)
TreeFam:
Gene Tree for RPL23P2 (if available)

No data available for Orthologs for RPL23P2 Gene

Paralogs for RPL23P2 Gene

No data available for Paralogs for RPL23P2 Gene

Variants for RPL23P2 Gene

Relevant External Links for RPL23P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23P2 Gene

Disorders for RPL23P2 Gene

No disorders were found for RPL23P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23P2 Gene

Publications for RPL23P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M … Chromosome 21 mapping and sequencing consortium (Nature 2000) 3 60

Products for RPL23P2 Gene

Sources for RPL23P2 Gene

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