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Aliases for RPL23P11 Gene

Subcategory (RNA class) for RPL23P11 Gene

lncRNA

Aliases for RPL23P11 Gene

  • Ribosomal Protein L23 Pseudogene 11 2 3 5
  • RPL23_6_1032 3

External Ids for RPL23P11 Gene

ORGUL Members for RPL23P11 Gene

Previous GeneCards Identifiers for RPL23P11 Gene

  • GC10U901136
  • GC10P034154

Summaries for RPL23P11 Gene

GeneCards Summary for RPL23P11 Gene

RPL23P11 (Ribosomal Protein L23 Pseudogene 11) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23P11 Gene

Genomics for RPL23P11 Gene

Regulatory Elements for RPL23P11 Gene

Enhancers for RPL23P11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F033861 1 Ensembl 0.8 -2.9 -2913 0.4 RPL23P11 GC10M033786
GH10F033868 0.5 ENCODE 0.4 +5.5 5471 2.1 JUND FOS REST RAD21 GC10P033875 RPL23P11
GH10F033799 0.5 ENCODE 0.2 -64.6 -64586 0.2 SOX13 SAP130 ZNF644 RAD21 RARA TEAD3 YY1 HNF4G NR2F6 MIXL1 GC10M033786 RPL23P11
GH10F033801 0.4 ENCODE 0.2 -62.4 -62396 0.2 PKNOX1 ZNF644 TEAD3 GATA3 CTBP1 FOS KLF8 TCF7L2 GATAD2A TEAD1 GC10M033786 RPL23P11
GH10F033800 1 ENCODE 0.2 -63.2 -63171 1.0 TGIF2 HLF CEBPA CEBPB CEBPG GC10M033786 RPL23P11
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL23P11 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23P11 Gene

Chromosome:
10
Start:
33,864,313 bp from pter
End:
33,864,723 bp from pter
Size:
411 bases
Orientation:
Plus strand

Genomic View for RPL23P11 Gene

Genes around RPL23P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23P11 Gene

Proteins for RPL23P11 Gene

Post-translational modifications for RPL23P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23P11 Gene

Domains & Families for RPL23P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23P11 Gene

Function for RPL23P11 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23P11 Gene

Localization for RPL23P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23P11 Gene

Pathways & Interactions for RPL23P11 Gene

SuperPathways for RPL23P11 Gene

No Data Available

Interacting Proteins for RPL23P11 Gene

Gene Ontology (GO) - Biological Process for RPL23P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23P11 Gene

Transcripts for RPL23P11 Gene

mRNA/cDNA for RPL23P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23P11 Gene

No ASD Table

Relevant External Links for RPL23P11 Gene

GeneLoc Exon Structure for
RPL23P11
ECgene alternative splicing isoforms for
RPL23P11

Expression for RPL23P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL23P11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23P11 Gene:

RPL23P11
genes like me logo Genes that share expression patterns with RPL23P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL23P11 Gene

Orthologs for RPL23P11 Gene

Evolution for RPL23P11 Gene

ENSEMBL:
Gene Tree for RPL23P11 (if available)
TreeFam:
Gene Tree for RPL23P11 (if available)

No data available for Orthologs for RPL23P11 Gene

Paralogs for RPL23P11 Gene

No data available for Paralogs for RPL23P11 Gene

Variants for RPL23P11 Gene

Relevant External Links for RPL23P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23P11 Gene

Disorders for RPL23P11 Gene

Relevant External Links for RPL23P11

Genetic Association Database (GAD)
RPL23P11

No disorders were found for RPL23P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL23P11 Gene

Publications for RPL23P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association study identifies BICD1 as a susceptibility gene for emphysema. (PMID: 20709820) Kong X. … Pillai S.G. (Am. J. Respir. Crit. Care Med. 2011) 46 64
  3. Genome-wide association analysis of gender differences in major depressive disorder in the Netherlands NESDA and NTR population-based samples. (PMID: 21621269) Aragam N. … Pan Y. (J Affect Disord 2011) 46 64
  4. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk J.B. … O'Connor G.T. (BMC Med. Genet. 2007) 46 64

Products for RPL23P11 Gene

Sources for RPL23P11 Gene

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