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Aliases for RPL23AP89 Gene

Subcategory (RNA class) for RPL23AP89 Gene

antisense

Aliases for RPL23AP89 Gene

  • Ribosomal Protein L23a Pseudogene 89 2 3 5

External Ids for RPL23AP89 Gene

ORGUL Members for RPL23AP89 Gene

Previous GeneCards Identifiers for RPL23AP89 Gene

  • GC00U936227

Summaries for RPL23AP89 Gene

GeneCards Summary for RPL23AP89 Gene

RPL23AP89 (Ribosomal Protein L23a Pseudogene 89) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RPL23AP89 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP89 Gene

Genomics for RPL23AP89 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP89 Gene

Promoters and enhancers for RPL23AP89 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I012081 Enhancer 1.1 ENCODE dbSUPER 550.8 -1.1 -1097 1.1 HDGF PKNOX1 ATF1 ARNT YY1 POLR2B E2F8 ATF7 MCM3 NCOA1 RPL23AP89 MIIP MFN2 UBIAD1 NPPA-AS1 TNFRSF8 GC01P012045 MIR7846
GH01I012078 Enhancer 1 ENCODE dbSUPER 550.8 +1.4 1395 1.4 HDGF FOXA2 SMAD1 RB1 KLF5 IRF4 RAD21 ZNF207 ZNF143 ETV6 GC01M012078 RPL23AP89 RNU6-777P TNFRSF8 GC01P012045
GH01I012018 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 11.4 +60.7 60677 2.4 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF2 SLC30A9 POLR2B ZNF143 FOS MIIP UBIAD1 TNFRSF8 RNU6-777P RPL23AP89 PLOD1 KIAA2013 LINC01647 NPPA-AS1 ENSG00000202461
GH01I012118 Enhancer 0.8 ENCODE 11.7 -38.2 -38222 0.2 HDGF ARNT KLF17 SIN3A NFXL1 ZNF2 RAD21 E2F8 ARID2 ZNF207 VPS13D RPL23AP89 RNU6-777P MIR7846 TNFRSF8 GC01P012045
GH01I012054 Enhancer 0.8 FANTOM5 dbSUPER 11.7 +26.1 26125 0.2 ZNF687 JUNB EBF1 ZNF592 ATF4 IKZF1 ATF7 RUNX3 IKZF2 TNFRSF8 RNU6-777P RPL23AP89 MFN2 MIIP GC01P012045
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL23AP89 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP89 Gene

Genomic Locations for RPL23AP89 Gene
chr1:12,080,293-12,080,547
(GRCh38/hg38)
Size:
255 bases
Orientation:
Minus strand
chr1:12,140,350-12,140,604
(GRCh37/hg19)

Genomic View for RPL23AP89 Gene

Genes around RPL23AP89 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP89 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP89 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP89 Gene

Proteins for RPL23AP89 Gene

Post-translational modifications for RPL23AP89 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP89 Gene

Domains & Families for RPL23AP89 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP89 Gene

Function for RPL23AP89 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP89 Gene

Localization for RPL23AP89 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP89 Gene

Pathways & Interactions for RPL23AP89 Gene

SuperPathways for RPL23AP89 Gene

No Data Available

Interacting Proteins for RPL23AP89 Gene

Gene Ontology (GO) - Biological Process for RPL23AP89 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP89 Gene

Drugs & Compounds for RPL23AP89 Gene

No Compound Related Data Available

Transcripts for RPL23AP89 Gene

mRNA/cDNA for RPL23AP89 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP89 Gene

No ASD Table

Relevant External Links for RPL23AP89 Gene

GeneLoc Exon Structure for
RPL23AP89
ECgene alternative splicing isoforms for
RPL23AP89

Expression for RPL23AP89 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP89 Gene:

RPL23AP89
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP89 Gene

Orthologs for RPL23AP89 Gene

Evolution for RPL23AP89 Gene

ENSEMBL:
Gene Tree for RPL23AP89 (if available)
TreeFam:
Gene Tree for RPL23AP89 (if available)

No data available for Orthologs for RPL23AP89 Gene

Paralogs for RPL23AP89 Gene

No data available for Paralogs for RPL23AP89 Gene

Variants for RPL23AP89 Gene

Additional Variant Information for RPL23AP89 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP89

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP89 Gene

Disorders for RPL23AP89 Gene

No disorders were found for RPL23AP89 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP89 Gene

Publications for RPL23AP89 Gene

No publications were found for RPL23AP89 Gene.

Products for RPL23AP89 Gene

Sources for RPL23AP89 Gene

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