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Aliases for RPL23AP82 Gene

Aliases for RPL23AP82 Gene

  • Ribosomal Protein L23a Pseudogene 82 2 3
  • RPL23A_43_1761 3

External Ids for RPL23AP82 Gene

Previous GeneCards Identifiers for RPL23AP82 Gene

  • GC22P049542
  • GC22P051195

Summaries for RPL23AP82 Gene

GeneCards Summary for RPL23AP82 Gene

RPL23AP82 (Ribosomal Protein L23a Pseudogene 82) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP82 Gene

Genomics for RPL23AP82 Gene

Regulatory Elements for RPL23AP82 Gene

Genomic Location for RPL23AP82 Gene

Start:
50,756,948 bp from pter
End:
50,801,309 bp from pter
Size:
44,362 bases
Orientation:
Plus strand

Genomic View for RPL23AP82 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RPL23AP82 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP82 Gene

Proteins for RPL23AP82 Gene

Post-translational modifications for RPL23AP82 Gene

No Post-translational modifications

Antibody Products

No data available for DME Specific Peptides for RPL23AP82 Gene

Domains for RPL23AP82 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP82 Gene

Function for RPL23AP82 Gene

Animal Model Products

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate RPL23AP82
    • Block miRNA regulation of RPL23AP82 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for RPL23AP82

    In Situ Assay Products

    Flow Cytometry Products

    No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RPL23AP82 Gene

    Localization for RPL23AP82 Gene

    Subcellular locations from

    COMPARTMENTS
    Jensen Localization Image for RPL23AP82 Gene COMPARTMENTS Subcellular localization image for RPL23AP82 gene
    Compartment Confidence
    cytosol 3
    nucleus 3

    No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for RPL23AP82 Gene

    Pathways for RPL23AP82 Gene

    SuperPathways for RPL23AP82 Gene

    No Data Available

    Interacting Proteins for RPL23AP82 Gene

    Gene Ontology (GO) - Biological Process for RPL23AP82 Gene

    None

    No data available for Pathways by source for RPL23AP82 Gene

    Transcripts for RPL23AP82 Gene

    Unigene Clusters for RPL23AP82 Gene

    Ribosomal protein L23a pseudogene 82:
    Representative Sequences:

    miRNA Products

    • QIAGEN qRT-PCR Assays for microRNAs that regulate RPL23AP82
      • Block miRNA regulation of RPL23AP82 using miScript Target Protectors

      Inhibitory RNA Products

      • Predesigned siRNA for gene silencing in human,mouse,rat for RPL23AP82

      Primer Products

      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat

      Flow Cytometry Products

      Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP82 Gene

      No ASD Table

      Relevant External Links for RPL23AP82 Gene

      GeneLoc Exon Structure for
      RPL23AP82
      ECgene alternative splicing isoforms for
      RPL23AP82

      Expression for RPL23AP82 Gene

      mRNA expression in normal human tissues for RPL23AP82 Gene

      mRNA expression in normal human tissues for RPL23AP82 Gene

      SOURCE GeneReport for Unigene cluster for RPL23AP82 Gene Hs.406135

      genes like me logo Genes that share expressions with RPL23AP82: view

      In Situ Assay Products

      No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for RPL23AP82 Gene

      Orthologs for RPL23AP82 Gene

      Evolution for RPL23AP82 Gene

      ENSEMBL:
      Gene Tree for RPL23AP82 (if available)
      TreeFam:
      Gene Tree for RPL23AP82 (if available)

      No data available for Orthologs for RPL23AP82 Gene

      Paralogs for RPL23AP82 Gene

      No data available for Paralogs for RPL23AP82 Gene

      Variants for RPL23AP82 Gene

      Sequence variations from dbSNP and Humsavar for RPL23AP82 Gene

      SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
      rs2340682 -- 50,796,156(+) gcttt(G/T)tgtga intron-variant
      rs2340683 -- 50,796,166(+) aattc(C/T)tctct intron-variant
      rs2340684 -- 50,796,225(+) acctt(C/G)cttac intron-variant
      rs2340685 -- 50,796,372(+) caagg(C/T)gagct intron-variant
      rs2341017 -- 50,762,376(+) TTCAC(A/G)ATAAT intron-variant

      Structural Variations from Database of Genomic Variants (DGV) for RPL23AP82 Gene

      Variant ID Type Subtype PubMed ID
      essv13762 CNV CNV 17122850
      nsv428394 CNV Loss 18775914
      esv25306 CNV Loss 19812545

      Relevant External Links for RPL23AP82 Gene

      HapMap Linkage Disequilibrium report
      RPL23AP82

      No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RPL23AP82 Gene

      Disorders for RPL23AP82 Gene

      No disorders were found for RPL23AP82 Gene.

      No data available for UniProtKB/Swiss-Prot for RPL23AP82 Gene

      Publications for RPL23AP82 Gene

      1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3
      2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
      3. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3

      Products for RPL23AP82 Gene

      • QIAGEN qRT-PCR Assays for microRNAs that regulate RPL23AP82
        • QuantiTect SYBR Green Assays in human,mouse,rat
        • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
        • QuantiFast Probe-based Assays in human,mouse,rat
        • Predesigned siRNA for gene silencing in human,mouse,rat for RPL23AP82
        • Block miRNA regulation of RPL23AP82 using miScript Target Protectors

        Sources for RPL23AP82 Gene

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