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Aliases for RPL23AP82 Gene

Aliases for RPL23AP82 Gene

  • Ribosomal Protein L23a Pseudogene 82 2 3
  • RPL23A_43_1761 3

External Ids for RPL23AP82 Gene

Previous GeneCards Identifiers for RPL23AP82 Gene

  • GC22P049542
  • GC22P051195

Summaries for RPL23AP82 Gene

GeneCards Summary for RPL23AP82 Gene

RPL23AP82 (Ribosomal Protein L23a Pseudogene 82) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP82 Gene

Genomics for RPL23AP82 Gene

Regulatory Elements for RPL23AP82 Gene

Genomic Location for RPL23AP82 Gene

Start:
50,756,948 bp from pter
End:
50,801,309 bp from pter
Size:
44,362 bases
Orientation:
Plus strand

Genomic View for RPL23AP82 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RPL23AP82 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP82 Gene

Proteins for RPL23AP82 Gene

Post-translational modifications for RPL23AP82 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP82 Gene

Domains for RPL23AP82 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP82 Gene

Function for RPL23AP82 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RPL23AP82 Gene

Localization for RPL23AP82 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RPL23AP82 Gene COMPARTMENTS Subcellular localization image for RPL23AP82 gene
Compartment Confidence
cytosol 3
nucleus 3

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for RPL23AP82 Gene

Pathways for RPL23AP82 Gene

SuperPathways for RPL23AP82 Gene

No Data Available

Interacting Proteins for RPL23AP82 Gene

Gene Ontology (GO) - Biological Process for RPL23AP82 Gene

None

No data available for Pathways by source for RPL23AP82 Gene

Transcripts for RPL23AP82 Gene

Unigene Clusters for RPL23AP82 Gene

Ribosomal protein L23a pseudogene 82:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP82 Gene

No ASD Table

Relevant External Links for RPL23AP82 Gene

GeneLoc Exon Structure for
RPL23AP82
ECgene alternative splicing isoforms for
RPL23AP82

Expression for RPL23AP82 Gene

mRNA expression in normal human tissues for RPL23AP82 Gene

mRNA expression in normal human tissues for RPL23AP82 Gene

SOURCE GeneReport for Unigene cluster for RPL23AP82 Gene Hs.406135

genes like me logo Genes that share expressions with RPL23AP82: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for RPL23AP82 Gene

Orthologs for RPL23AP82 Gene

Evolution for RPL23AP82 Gene

ENSEMBL:
Gene Tree for RPL23AP82 (if available)
TreeFam:
Gene Tree for RPL23AP82 (if available)

No data available for Orthologs for RPL23AP82 Gene

Paralogs for RPL23AP82 Gene

No data available for Paralogs for RPL23AP82 Gene

Variants for RPL23AP82 Gene

Sequence variations from dbSNP and Humsavar for RPL23AP82 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs2340682 -- 50,796,156(+) gcttt(G/T)tgtga intron-variant
rs2340683 -- 50,796,166(+) aattc(C/T)tctct intron-variant
rs2340684 -- 50,796,225(+) acctt(C/G)cttac intron-variant
rs2340685 -- 50,796,372(+) caagg(C/T)gagct intron-variant
rs2341017 -- 50,762,376(+) TTCAC(A/G)ATAAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RPL23AP82 Gene

Variant ID Type Subtype PubMed ID
essv13762 CNV CNV 17122850
nsv428394 CNV Loss 18775914
esv25306 CNV Loss 19812545

Relevant External Links for RPL23AP82 Gene

HapMap Linkage Disequilibrium report
RPL23AP82

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RPL23AP82 Gene

Disorders for RPL23AP82 Gene

No disorders were found for RPL23AP82 Gene.

No data available for UniProtKB/Swiss-Prot for RPL23AP82 Gene

Publications for RPL23AP82 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3

Products for RPL23AP82 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate RPL23AP82
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for RPL23AP82
    • Block miRNA regulation of RPL23AP82 using miScript Target Protectors

    Sources for RPL23AP82 Gene

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