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Aliases for RPL23AP80 Gene

Subcategory (RNA class) for RPL23AP80 Gene


Aliases for RPL23AP80 Gene

  • Ribosomal Protein L23a Pseudogene 80 2 3 5
  • RPL23A_35_1661 3

External Ids for RPL23AP80 Gene

ORGUL Members for RPL23AP80 Gene

Previous GeneCards Identifiers for RPL23AP80 Gene

  • GC19M052992
  • GC19M048299

Summaries for RPL23AP80 Gene

GeneCards Summary for RPL23AP80 Gene

RPL23AP80 (Ribosomal Protein L23a Pseudogene 80) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP80 Gene

Genomics for RPL23AP80 Gene

Regulatory Elements for RPL23AP80 Gene

Enhancers for RPL23AP80 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F047798 0.6 FANTOM5 0.8 -3.3 -3251 0.2 CABP5 CRX SNORD23 GLTSCR2 SULT2A1 RPL23AP80 TPRX1
GH19F047799 0.8 FANTOM5 0.8 -4.2 -4189 0.2 ZNF366 YBX1 ZBTB17 CRX SNORD23 GLTSCR2 SULT2A1 CABP5 RPL23AP80 TPRX1
GH19F047809 0.5 ENCODE 0.4 -15.0 -14957 0.2 ZFHX2 CEBPB FOS PRDM1 SP7 ZNF18 RARA EGR2 TPRX1 RPL23AP80
GH19F047813 0.6 ENCODE 0.3 -19.0 -18957 0.2 CTCF SAP130 RAD21 FOSL1 CTBP1 GATA3 ZBTB48 SMC3 ZNF143 NR2F6 TPRX1 RPL23AP80
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL23AP80 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23AP80 Gene

47,794,466 bp from pter
47,794,902 bp from pter
437 bases
Minus strand

Genomic View for RPL23AP80 Gene

Genes around RPL23AP80 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP80 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP80 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP80 Gene

Proteins for RPL23AP80 Gene

Post-translational modifications for RPL23AP80 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP80 Gene

Domains & Families for RPL23AP80 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP80 Gene

Function for RPL23AP80 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP80 Gene

Localization for RPL23AP80 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23AP80 Gene

Pathways & Interactions for RPL23AP80 Gene

SuperPathways for RPL23AP80 Gene

No Data Available

Interacting Proteins for RPL23AP80 Gene

Gene Ontology (GO) - Biological Process for RPL23AP80 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL23AP80 Gene

Transcripts for RPL23AP80 Gene

mRNA/cDNA for RPL23AP80 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP80 Gene

No ASD Table

Relevant External Links for RPL23AP80 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL23AP80 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL23AP80 Gene

mRNA expression in normal human tissues for RPL23AP80 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP80 Gene:

genes like me logo Genes that share expression patterns with RPL23AP80: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL23AP80 Gene

Orthologs for RPL23AP80 Gene

Evolution for RPL23AP80 Gene

Gene Tree for RPL23AP80 (if available)
Gene Tree for RPL23AP80 (if available)

No data available for Orthologs for RPL23AP80 Gene

Paralogs for RPL23AP80 Gene

No data available for Paralogs for RPL23AP80 Gene

Variants for RPL23AP80 Gene

Relevant External Links for RPL23AP80 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP80 Gene

Disorders for RPL23AP80 Gene

No disorders were found for RPL23AP80 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP80 Gene

Publications for RPL23AP80 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL23AP80 Gene

Sources for RPL23AP80 Gene

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