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Aliases for RPL23AP75 Gene

Aliases for RPL23AP75 Gene

  • Ribosomal Protein L23a Pseudogene 75 2 3 5
  • RPL23A_32_1546 3

External Ids for RPL23AP75 Gene

Previous GeneCards Identifiers for RPL23AP75 Gene

  • GC17M035850
  • GC17M038596

Summaries for RPL23AP75 Gene

GeneCards Summary for RPL23AP75 Gene

RPL23AP75 (Ribosomal Protein L23a Pseudogene 75) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP75 Gene

Genomics for RPL23AP75 Gene

Regulatory Elements for RPL23AP75 Gene

Enhancers for RPL23AP75 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F040455 1.3 FANTOM5 Ensembl ENCODE 22.2 -20.7 -20679 9.4 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF207 ZNF263 PAF1 RPL23AP75 LOC105371776 KRTAP9-2 CDC6 TNS4 GJD3 TOP2A KRT23 ENSG00000266208 IGFBP4
GH17F040528 1.3 FANTOM5 Ensembl ENCODE 21.9 -96.7 -96672 15.8 HDGF PKNOX1 ARNT WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 RPL23AP75 CCR7 LOC105371776 KRTAP9-2 RARA TOP2A IGFBP4 CDC6 SMARCE1 GRB7
GH17F040419 0.2 ENCODE 12 +20.2 20235 1.0 ATF1 MLX ARID4B DMAP1 ZNF48 SLC30A9 SP5 NFYC MXD4 MIER2 IGFBP4 RPL23AP75 RARA GC17M040417 GC17M040441
GH17F040471 0.5 ENCODE 11.9 -30.4 -30369 0.1 ZNF664 CHD7 IGFBP4 RPL23AP75 TNS4 TOP2A CDC6 GC17P040473
GH17F040415 0.6 ENCODE 11.6 +22.7 22719 4.0 PKNOX1 ARNT CREB3L1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 FOS MED1 CDK12 SNORD124 RPL23AP75 IGFBP4 RARA ENSG00000266208 RARA-AS1 TOP2A GC17P040406
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL23AP75 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23AP75 Gene

Chromosome:
17
Start:
40,439,430 bp from pter
End:
40,439,935 bp from pter
Size:
506 bases
Orientation:
Minus strand

Genomic View for RPL23AP75 Gene

Genes around RPL23AP75 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP75 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP75 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP75 Gene

Proteins for RPL23AP75 Gene

Post-translational modifications for RPL23AP75 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP75 Gene

Domains & Families for RPL23AP75 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP75 Gene

Function for RPL23AP75 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP75 Gene

Localization for RPL23AP75 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23AP75 Gene

Pathways & Interactions for RPL23AP75 Gene

SuperPathways for RPL23AP75 Gene

No Data Available

Interacting Proteins for RPL23AP75 Gene

Gene Ontology (GO) - Biological Process for RPL23AP75 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP75 Gene

Transcripts for RPL23AP75 Gene

mRNA/cDNA for RPL23AP75 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP75 Gene

No ASD Table

Relevant External Links for RPL23AP75 Gene

GeneLoc Exon Structure for
RPL23AP75
ECgene alternative splicing isoforms for
RPL23AP75

Expression for RPL23AP75 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL23AP75 Gene

mRNA differential expression in normal tissues according to GTEx for RPL23AP75 Gene

This gene is overexpressed in Testis (x40.8).

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP75 Gene:

RPL23AP75
genes like me logo Genes that share expression patterns with RPL23AP75: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL23AP75 Gene

Orthologs for RPL23AP75 Gene

Evolution for RPL23AP75 Gene

ENSEMBL:
Gene Tree for RPL23AP75 (if available)
TreeFam:
Gene Tree for RPL23AP75 (if available)

No data available for Orthologs for RPL23AP75 Gene

Paralogs for RPL23AP75 Gene

No data available for Paralogs for RPL23AP75 Gene

Variants for RPL23AP75 Gene

Relevant External Links for RPL23AP75 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP75

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP75 Gene

Disorders for RPL23AP75 Gene

No disorders were found for RPL23AP75 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP75 Gene

Publications for RPL23AP75 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL23AP75 Gene

Sources for RPL23AP75 Gene

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