Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL23AP7 Gene

Aliases for RPL23AP7 Gene

  • Ribosomal Protein L23a Pseudogene 7 2 3 5
  • Ribosomal Protein L23a-Like 1 3
  • RPL23A_6_267 3
  • BA395L14.9 3
  • RPL23AL1 3

External Ids for RPL23AP7 Gene

Previous GeneCards Identifiers for RPL23AP7 Gene

  • GC02U990310
  • GC02M112289
  • GC02M114275
  • GC02M114464
  • GC02M114085
  • GC02M114370
  • GC07M000122

Summaries for RPL23AP7 Gene

GeneCards Summary for RPL23AP7 Gene

RPL23AP7 (Ribosomal Protein L23a Pseudogene 7) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP7 Gene

Genomics for RPL23AP7 Gene

Regulatory Elements for RPL23AP7 Gene

Enhancers for RPL23AP7 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around RPL23AP7 on UCSC Golden Path with GeneCards custom track

Promoters for RPL23AP7 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around RPL23AP7 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23AP7 Gene

Chromosome:
2
Start:
113,610,502 bp from pter
End:
113,627,138 bp from pter
Size:
16,637 bases
Orientation:
Minus strand

Genomic View for RPL23AP7 Gene

Genes around RPL23AP7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP7 Gene

Proteins for RPL23AP7 Gene

Post-translational modifications for RPL23AP7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP7 Gene

Domains & Families for RPL23AP7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP7 Gene

Function for RPL23AP7 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP7 Gene

Localization for RPL23AP7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23AP7 Gene

Pathways & Interactions for RPL23AP7 Gene

SuperPathways for RPL23AP7 Gene

No Data Available

Interacting Proteins for RPL23AP7 Gene

Gene Ontology (GO) - Biological Process for RPL23AP7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP7 Gene

Drugs & Compounds for RPL23AP7 Gene

No Compound Related Data Available

Transcripts for RPL23AP7 Gene

mRNA/cDNA for RPL23AP7 Gene

Unigene Clusters for RPL23AP7 Gene

Ribosomal protein L23a pseudogene 7:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP7 Gene

No ASD Table

Relevant External Links for RPL23AP7 Gene

GeneLoc Exon Structure for
RPL23AP7
ECgene alternative splicing isoforms for
RPL23AP7

Expression for RPL23AP7 Gene

mRNA expression in normal human tissues for RPL23AP7 Gene

SOURCE GeneReport for Unigene cluster for RPL23AP7 Gene Hs.595056

genes like me logo Genes that share expression patterns with RPL23AP7: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RPL23AP7 Gene

Orthologs for RPL23AP7 Gene

Evolution for RPL23AP7 Gene

ENSEMBL:
Gene Tree for RPL23AP7 (if available)
TreeFam:
Gene Tree for RPL23AP7 (if available)

No data available for Orthologs for RPL23AP7 Gene

Paralogs for RPL23AP7 Gene

No data available for Paralogs for RPL23AP7 Gene

Variants for RPL23AP7 Gene

Sequence variations from dbSNP and Humsavar for RPL23AP7 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs632418 -- 113,620,678(-) GCTCA(C/T)TGCTA intron-variant
rs662037 -- 113,618,610(-) ataAG(A/G)TTTTC intron-variant
rs686186 -- 113,612,188(+) TTTAA(A/G)GCCTT nc-transcript-variant
rs793063 -- 113,617,300(-) atcat(C/T)tggaa intron-variant
rs793064 -- 113,617,202(-) gcaga(G/T)cctca intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RPL23AP7 Gene

Variant ID Type Subtype PubMed ID
esv380 CNV CNV 17122850
essv901 CNV CNV 17122850
nsv821507 CNV Duplication 20802225
nsv508163 CNV Loss 20534489

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for RPL23AP7 Gene

Disorders for RPL23AP7 Gene

Relevant External Links for RPL23AP7

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPL23AP7

No disorders were found for RPL23AP7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL23AP7 Gene

Publications for RPL23AP7 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 67
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. Nucleotide sequence of a cDNA clone (SUBT1) partly homologous to a human subtelomeric repeat sequence. (PMID: 8799457) Lagercrantz J. … Lagercrantz S. (Biochem. Mol. Biol. Int. 1996) 3

Products for RPL23AP7 Gene

Sources for RPL23AP7 Gene

Content