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Aliases for RPL23AP66 Gene

Subcategory (RNA class) for RPL23AP66 Gene

antisense

Aliases for RPL23AP66 Gene

  • Ribosomal Protein L23a Pseudogene 66 2 3 5
  • RPL23A_30_1207 3

External Ids for RPL23AP66 Gene

ORGUL Members for RPL23AP66 Gene

Previous GeneCards Identifiers for RPL23AP66 Gene

  • GC12U901114
  • GC12P012493
  • GC12P012494

Summaries for RPL23AP66 Gene

GeneCards Summary for RPL23AP66 Gene

RPL23AP66 (Ribosomal Protein L23a Pseudogene 66) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP66 Gene

Genomics for RPL23AP66 Gene

Regulatory Elements for RPL23AP66 Gene

Enhancers for RPL23AP66 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F012332 1 Ensembl ENCODE 0.8 -4.4 -4405 2.9 PKNOX1 CREB3L1 ARID4B FEZF1 ZNF2 YY1 ZNF143 ZNF207 KLF7 JUNB DDX47 LRP6 MANSC1 RPL23AP66 GC12M012310
GH12F012337 0.9 Ensembl ENCODE 0.8 -0.7 -669 2.2 ZNF263 HDGF ZNF316 POLR2A JUN MAFK PRDM1 MANSC1 BORCS5 RPL23AP66 GC12M012310
GH12F012336 0.2 Ensembl 0.8 -2.3 -2345 0.7 MLX ARID4B RAD21 YY1 RARA SLC30A9 GATA4 CREM MIXL1 HMG20B RPL23AP66 GC12M012310
GH12F012331 1.2 Ensembl ENCODE 0.4 -6.7 -6712 1.6 ZNF121 ZFHX2 CTBP1 ZIC2 EGR2 LOH12CR2 BORCS5 CDKN1B RPL23AP66 GC12M012310
GH12F012327 1.3 Ensembl ENCODE 0.4 -10.8 -10802 1.2 CTCF RAD21 RFX5 ZNF366 ZNF143 SMC3 ETV6 MIXL1 ZNF263 SRF LOH12CR2 BORCS5 MANSC1 CDKN1B LRP6 RPL23AP66 GC12M012310
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL23AP66 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23AP66 Gene

Chromosome:
12
Start:
12,338,776 bp from pter
End:
12,339,254 bp from pter
Size:
479 bases
Orientation:
Plus strand

Genomic View for RPL23AP66 Gene

Genes around RPL23AP66 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP66 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP66 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP66 Gene

Proteins for RPL23AP66 Gene

Post-translational modifications for RPL23AP66 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP66 Gene

Domains & Families for RPL23AP66 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP66 Gene

Function for RPL23AP66 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP66 Gene

Localization for RPL23AP66 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23AP66 Gene

Pathways & Interactions for RPL23AP66 Gene

SuperPathways for RPL23AP66 Gene

No Data Available

Interacting Proteins for RPL23AP66 Gene

Gene Ontology (GO) - Biological Process for RPL23AP66 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP66 Gene

Transcripts for RPL23AP66 Gene

mRNA/cDNA for RPL23AP66 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP66 Gene

No ASD Table

Relevant External Links for RPL23AP66 Gene

GeneLoc Exon Structure for
RPL23AP66
ECgene alternative splicing isoforms for
RPL23AP66

Expression for RPL23AP66 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL23AP66 Gene

mRNA differential expression in normal tissues according to GTEx for RPL23AP66 Gene

This gene is overexpressed in Whole Blood (x5.7).

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP66 Gene:

RPL23AP66
genes like me logo Genes that share expression patterns with RPL23AP66: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL23AP66 Gene

Orthologs for RPL23AP66 Gene

Evolution for RPL23AP66 Gene

ENSEMBL:
Gene Tree for RPL23AP66 (if available)
TreeFam:
Gene Tree for RPL23AP66 (if available)

No data available for Orthologs for RPL23AP66 Gene

Paralogs for RPL23AP66 Gene

No data available for Paralogs for RPL23AP66 Gene

Variants for RPL23AP66 Gene

Relevant External Links for RPL23AP66 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP66

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP66 Gene

Disorders for RPL23AP66 Gene

No disorders were found for RPL23AP66 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP66 Gene

Publications for RPL23AP66 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL23AP66 Gene

Sources for RPL23AP66 Gene

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