Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL23AP65 Gene

Aliases for RPL23AP65 Gene

  • Ribosomal Protein L23a Pseudogene 65 2 3 5
  • RPL23A_27_1119 3

External Ids for RPL23AP65 Gene

Previous GeneCards Identifiers for RPL23AP65 Gene

  • GC11P009585

Summaries for RPL23AP65 Gene

GeneCards Summary for RPL23AP65 Gene

RPL23AP65 (Ribosomal Protein L23a Pseudogene 65) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP65 Gene

Genomics for RPL23AP65 Gene

Regulatory Elements for RPL23AP65 Gene

Enhancers for RPL23AP65 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F009624 1 FANTOM5 Ensembl ENCODE 4.9 +20.3 20310 3.7 JUN MAX EBF1 RAD21 YY1 ZNF664 ZFHX2 POLR2A NR2F6 EGR2 SWAP70 RPL21P97 RPL23AP65 ENSG00000255463 GC11M009621
GH11F009638 0.6 Ensembl ENCODE 4.8 +33.5 33467 2.8 ELF3 SMARCE1 ESRRA PKNOX1 MAX CEBPB ZNF384 ATF2 NR2F2 ZNF316 SWAP70 RPL21P97 ENSG00000238387 WEE1 RPL23AP65 ENSG00000255463 GC11P009661
GH11F009661 1 FANTOM5 Ensembl ENCODE 4.8 +57.2 57188 4.6 ELF3 PKNOX1 SIN3A ZNF48 RAD21 RFX5 GLIS2 SMARCC1 SP3 CEBPB SWAP70 RPL23AP65 SBF2-AS1 ZNF143 RPL21P97
GH11F009600 1.5 FANTOM5 Ensembl ENCODE 0.8 -4.6 -4584 2.5 HDGF TBL1XR1 MAX EBF1 ZBTB40 ETS1 RELA ZFHX2 POLR2A EGR1 WEE1 SWAP70 IPO7 ZNF143 RPL23AP65 GC11P009580
GH11F009606 0.2 ENCODE 0.8 +1.3 1277 0.9 CTCF TFAP4 ETV1 ARID4B RAD21 EED PRDM10 CREM GATAD2A MTA2 SWAP70 ENSG00000238387 WEE1 RPL21P97 GC11M009608 RPL23AP65
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL23AP65 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23AP65 Gene

Chromosome:
11
Start:
9,606,134 bp from pter
End:
9,606,682 bp from pter
Size:
549 bases
Orientation:
Plus strand

Genomic View for RPL23AP65 Gene

Genes around RPL23AP65 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP65 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP65 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP65 Gene

Proteins for RPL23AP65 Gene

Post-translational modifications for RPL23AP65 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP65 Gene

Domains & Families for RPL23AP65 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP65 Gene

Function for RPL23AP65 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP65 Gene

Localization for RPL23AP65 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23AP65 Gene

Pathways & Interactions for RPL23AP65 Gene

SuperPathways for RPL23AP65 Gene

No Data Available

Interacting Proteins for RPL23AP65 Gene

Gene Ontology (GO) - Biological Process for RPL23AP65 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP65 Gene

Transcripts for RPL23AP65 Gene

mRNA/cDNA for RPL23AP65 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP65 Gene

No ASD Table

Relevant External Links for RPL23AP65 Gene

GeneLoc Exon Structure for
RPL23AP65
ECgene alternative splicing isoforms for
RPL23AP65

Expression for RPL23AP65 Gene

mRNA expression in normal human tissues for RPL23AP65 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP65 Gene:

RPL23AP65
genes like me logo Genes that share expression patterns with RPL23AP65: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL23AP65 Gene

Orthologs for RPL23AP65 Gene

Evolution for RPL23AP65 Gene

ENSEMBL:
Gene Tree for RPL23AP65 (if available)
TreeFam:
Gene Tree for RPL23AP65 (if available)

No data available for Orthologs for RPL23AP65 Gene

Paralogs for RPL23AP65 Gene

No data available for Paralogs for RPL23AP65 Gene

Variants for RPL23AP65 Gene

Relevant External Links for RPL23AP65 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP65

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP65 Gene

Disorders for RPL23AP65 Gene

No disorders were found for RPL23AP65 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP65 Gene

Publications for RPL23AP65 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL23AP65 Gene

Sources for RPL23AP65 Gene

Content
Loading form....