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Aliases for RPL23AP61 Gene

Aliases for RPL23AP61 Gene

  • Ribosomal Protein L23a Pseudogene 61 2 3 5
  • RPL23A_22_1044 3

External Ids for RPL23AP61 Gene

Previous GeneCards Identifiers for RPL23AP61 Gene

  • GC10M051204
  • GC10U901157
  • GC10M051533

Summaries for RPL23AP61 Gene

GeneCards Summary for RPL23AP61 Gene

RPL23AP61 (Ribosomal Protein L23a Pseudogene 61) is a Pseudogene.

Additional gene information for RPL23AP61 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP61 Gene

Genomics for RPL23AP61 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP61 Gene

Promoters and enhancers for RPL23AP61 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I046076 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +14.4 14381 2.2 HDAC1 MEIS2 PKNOX1 TAL1 MAX CEBPG IRF9 TCF12 CTBP1 ZNF766 AGAP7P MSMB RPL23AP61 GC10M046105 PIR51454
GH10I046079 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +17.1 17100 2.4 SMARCE1 CEBPB CEBPG EP300 GATA3 POLR2A VEZF1 HMBOX1 PRDM10 ZBTB33 MSMB AGAP7P NCOA4 RPL23AP61 GC10M046105 PIR51454
GH10I046091 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +31.4 31367 7 ELF3 MLX ARID4B DMAP1 RAD21 RARA GLIS2 IKZF2 MIXL1 EGR2 MSMB NCOA4 AGAP7P BMS1P1 FAM35BP TIMM23 GC10M046105 PIR51454 RPL23AP61
GH10I046051 Enhancer 0.9 ENCODE 0.4 -10.5 -10548 2.3 FOXA2 MLX ZFP64 ZNF133 ARID4B DMAP1 ZNF48 SP5 MXD4 PPARG AGAP7P MSMB RPL23AP61
GH10I046048 Enhancer 0.8 ENCODE 0.4 -14.9 -14923 0.2 NCOA3 SOX13 CTCF ESRRA NFIB SIN3A FEZF1 THRB RAD21 RARA MSMB RPL23AP61
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL23AP61 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP61 Gene

Genomic Locations for RPL23AP61 Gene
chr10:46,063,250-46,063,720
(GRCh38/hg38)
Size:
471 bases
Orientation:
Plus strand
chr10:51,532,102-51,532,572
(GRCh37/hg19)

Genomic View for RPL23AP61 Gene

Genes around RPL23AP61 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP61 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP61 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP61 Gene

Proteins for RPL23AP61 Gene

Post-translational modifications for RPL23AP61 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP61 Gene

Domains & Families for RPL23AP61 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP61 Gene

Function for RPL23AP61 Gene

Phenotypes From GWAS Catalog for RPL23AP61 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP61 Gene

Localization for RPL23AP61 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP61 Gene

Pathways & Interactions for RPL23AP61 Gene

SuperPathways for RPL23AP61 Gene

No Data Available

Interacting Proteins for RPL23AP61 Gene

Gene Ontology (GO) - Biological Process for RPL23AP61 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP61 Gene

Drugs & Compounds for RPL23AP61 Gene

No Compound Related Data Available

Transcripts for RPL23AP61 Gene

mRNA/cDNA for RPL23AP61 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP61 Gene

No ASD Table

Relevant External Links for RPL23AP61 Gene

GeneLoc Exon Structure for
RPL23AP61
ECgene alternative splicing isoforms for
RPL23AP61

Expression for RPL23AP61 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP61 Gene

mRNA expression in normal human tissues for RPL23AP61 Gene

mRNA differential expression in normal tissues according to GTEx for RPL23AP61 Gene

This gene is overexpressed in Prostate (x51.4).

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP61 Gene:

RPL23AP61
genes like me logo Genes that share expression patterns with RPL23AP61: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP61 Gene

Orthologs for RPL23AP61 Gene

Evolution for RPL23AP61 Gene

ENSEMBL:
Gene Tree for RPL23AP61 (if available)
TreeFam:
Gene Tree for RPL23AP61 (if available)

No data available for Orthologs for RPL23AP61 Gene

Paralogs for RPL23AP61 Gene

No data available for Paralogs for RPL23AP61 Gene

Variants for RPL23AP61 Gene

Additional Variant Information for RPL23AP61 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP61

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP61 Gene

Disorders for RPL23AP61 Gene

No disorders were found for RPL23AP61 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP61 Gene

Publications for RPL23AP61 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL23AP61 Gene

Sources for RPL23AP61 Gene

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