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Aliases for RPL23AP58 Gene

Subcategory (RNA class) for RPL23AP58 Gene

antisense

Aliases for RPL23AP58 Gene

  • Ribosomal Protein L23a Pseudogene 58 2 3 5
  • RPL23A_23_1090 3

External Ids for RPL23AP58 Gene

ORGUL Members for RPL23AP58 Gene

Previous GeneCards Identifiers for RPL23AP58 Gene

  • GC10U901145
  • GC10M104333

Summaries for RPL23AP58 Gene

GeneCards Summary for RPL23AP58 Gene

RPL23AP58 (Ribosomal Protein L23a Pseudogene 58) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP58 Gene

Genomics for RPL23AP58 Gene

Regulatory Elements for RPL23AP58 Gene

Enhancers for RPL23AP58 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F102578 1 Ensembl ENCODE 0.4 -7.1 -7076 3.4 HDGF PKNOX1 ARNT SIN3A FEZF1 YY1 ZNF766 ZNF143 FOS ZNF263 MFSD13A ACTR1A SUFU C10orf95 NFKB2 POLL AS3MT RPL23AP58 GC10P102592
GH10F102583 0.2 ENCODE 0.4 -10.8 -10774 0.2 CTCF SAP130 KLF17 ARID4B MAX RAD21 RFX5 RELA ZNF324 ZBTB48 GC10P102592 RPL23AP58
GH10F102555 1 Ensembl ENCODE 0.3 +16.8 16830 1.2 ZNF263 ZFHX2 BHLHE40 ZMYM3 ZBTB33 FOS EGR2 MFSD13A RPL23AP58 GC10P102525
GH10F102545 1.1 Ensembl ENCODE 0.3 +26.5 26487 1.5 HDAC1 ATF1 PKNOX1 ARNT CREB3L1 NFRKB SIN3A FEZF1 RAD21 YY1 MFSD13A GC10P102525 RPL23AP58
GH10F102542 0.2 ENCODE 0.3 +30.3 30253 1.1 ZNF263 ATF1 ZNF157 FOS SMAD4 MAFK ATF2 MFSD13A ARL3 ACTR1A GC10P102525 RPL23AP58
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL23AP58 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23AP58 Gene

Chromosome:
10
Start:
102,572,757 bp from pter
End:
102,573,225 bp from pter
Size:
469 bases
Orientation:
Minus strand

Genomic View for RPL23AP58 Gene

Genes around RPL23AP58 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP58 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP58 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP58 Gene

Proteins for RPL23AP58 Gene

Post-translational modifications for RPL23AP58 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP58 Gene

Domains & Families for RPL23AP58 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP58 Gene

Function for RPL23AP58 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP58 Gene

Localization for RPL23AP58 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23AP58 Gene

Pathways & Interactions for RPL23AP58 Gene

SuperPathways for RPL23AP58 Gene

No Data Available

Interacting Proteins for RPL23AP58 Gene

Gene Ontology (GO) - Biological Process for RPL23AP58 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP58 Gene

Transcripts for RPL23AP58 Gene

mRNA/cDNA for RPL23AP58 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP58 Gene

No ASD Table

Relevant External Links for RPL23AP58 Gene

GeneLoc Exon Structure for
RPL23AP58
ECgene alternative splicing isoforms for
RPL23AP58

Expression for RPL23AP58 Gene

mRNA expression in normal human tissues for RPL23AP58 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP58 Gene:

RPL23AP58
genes like me logo Genes that share expression patterns with RPL23AP58: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL23AP58 Gene

Orthologs for RPL23AP58 Gene

Evolution for RPL23AP58 Gene

ENSEMBL:
Gene Tree for RPL23AP58 (if available)
TreeFam:
Gene Tree for RPL23AP58 (if available)

No data available for Orthologs for RPL23AP58 Gene

Paralogs for RPL23AP58 Gene

No data available for Paralogs for RPL23AP58 Gene

Variants for RPL23AP58 Gene

Relevant External Links for RPL23AP58 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP58

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP58 Gene

Disorders for RPL23AP58 Gene

No disorders were found for RPL23AP58 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP58 Gene

Publications for RPL23AP58 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL23AP58 Gene

Sources for RPL23AP58 Gene

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