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Aliases for RPL23AP49 Gene

Aliases for RPL23AP49 Gene

  • Ribosomal Protein L23a Pseudogene 49 2 3 5
  • RPL23A_12_383 3

External Ids for RPL23AP49 Gene

Previous GeneCards Identifiers for RPL23AP49 Gene

  • GC03U901253

Summaries for RPL23AP49 Gene

GeneCards Summary for RPL23AP49 Gene

RPL23AP49 (Ribosomal Protein L23a Pseudogene 49) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP49 Gene

Genomics for RPL23AP49 Gene

Regulatory Elements for RPL23AP49 Gene

Enhancers for RPL23AP49 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G075784 0.9 ENCODE 10.6 -115.2 -115228 1.7 TBP RB1 CREB3L1 ZNF76 SIN3A ZBTB40 YY1 ZNF121 EGR1 ZNF143 LINC00960 RPL23AP49 ZNF717 MIR4273
GH03G075432 1 ENCODE 6.6 +235.7 235653 4.3 HDGF PKNOX1 FOXA2 ARID4B SIN3A DMAP1 YY1 ZNF121 GLIS2 ZNF143 HNRNPA3P6 FAM86DP LINC02018 RPL23AP49 ALG1L6P
GH03G075422 0.9 Ensembl ENCODE 6.9 +247.4 247420 1.5 CTCF ZNF654 NR2F1 TRIM22 REST RAD21 SCRT2 NR2C1 ZNF143 MLLT1 RPL23AP49 LINC02018 ALG1L6P FAM86DP
GH03G075781 0.6 ENCODE 9.5 -111.5 -111489 0.9 SP1 MTA2 NFYB JUNB RELB DPF2 TBX21 SPI1 LINC00960 RPL23AP49 FAM86DP ZNF717 MIR4273
GH03G075101 0.6 ENCODE 4.3 +568.3 568320 0.9 POLR2A BHLHE40 MAX CTBP2 MNT RBBP5 TBX21 RPL23AP49 PIR53018 PIR33825
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL23AP49 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23AP49 Gene

Chromosome:
3
Start:
75,624,275 bp from pter
End:
75,670,156 bp from pter
Size:
45,882 bases
Orientation:
Minus strand

Genomic View for RPL23AP49 Gene

Genes around RPL23AP49 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP49 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP49 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP49 Gene

Proteins for RPL23AP49 Gene

Post-translational modifications for RPL23AP49 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP49 Gene

Domains & Families for RPL23AP49 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP49 Gene

Function for RPL23AP49 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP49 Gene

Localization for RPL23AP49 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23AP49 Gene

Pathways & Interactions for RPL23AP49 Gene

SuperPathways for RPL23AP49 Gene

No Data Available

Interacting Proteins for RPL23AP49 Gene

Gene Ontology (GO) - Biological Process for RPL23AP49 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP49 Gene

Drugs & Compounds for RPL23AP49 Gene

No Compound Related Data Available

Transcripts for RPL23AP49 Gene

mRNA/cDNA for RPL23AP49 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP49 Gene

No ASD Table

Relevant External Links for RPL23AP49 Gene

GeneLoc Exon Structure for
RPL23AP49
ECgene alternative splicing isoforms for
RPL23AP49

Expression for RPL23AP49 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP49 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP49 Gene:

RPL23AP49
genes like me logo Genes that share expression patterns with RPL23AP49: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP49 Gene

Orthologs for RPL23AP49 Gene

Evolution for RPL23AP49 Gene

ENSEMBL:
Gene Tree for RPL23AP49 (if available)
TreeFam:
Gene Tree for RPL23AP49 (if available)

No data available for Orthologs for RPL23AP49 Gene

Paralogs for RPL23AP49 Gene

No data available for Paralogs for RPL23AP49 Gene

Variants for RPL23AP49 Gene

Relevant External Links for RPL23AP49 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP49

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP49 Gene

Disorders for RPL23AP49 Gene

No disorders were found for RPL23AP49 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP49 Gene

Publications for RPL23AP49 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL23AP49 Gene

Sources for RPL23AP49 Gene

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