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Aliases for RPL23AP46 Gene

Aliases for RPL23AP46 Gene

  • Ribosomal Protein L23a Pseudogene 46 2 3 5
  • RPL23A_17_757 3

External Ids for RPL23AP46 Gene

Previous GeneCards Identifiers for RPL23AP46 Gene

  • GC06M133361

Summaries for RPL23AP46 Gene

GeneCards Summary for RPL23AP46 Gene

RPL23AP46 (Ribosomal Protein L23a Pseudogene 46) is a Pseudogene.

Additional gene information for RPL23AP46 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP46 Gene

Genomics for RPL23AP46 Gene

Regulatory Elements for RPL23AP46 Gene

Enhancers for RPL23AP46 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H132963 1 ENCODE 0.3 +33.5 33519 1 PKNOX1 FOXA2 ATF1 FEZF1 TCF12 GATA2 ELK1 FOS ATF7 SP3 EYA4 LOC105378008 RPL23AP46
GH06H132995 0.2 ENCODE 0.7 +2.5 2484 0 RPL23AP46 LOC105378008
GH06H132950 0.7 ENCODE 0.2 +45.7 45674 3 SOX5 SOX13 GATAD2A ZNF3 FOXA2 FOXA3 HMG20A ATF2 RARA CEBPA LINC00326 LOC105378008 RPL23AP46
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL23AP46 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23AP46 Gene

Chromosome:
6
Start:
132,997,551 bp from pter
End:
132,998,040 bp from pter
Size:
490 bases
Orientation:
Minus strand

Genomic View for RPL23AP46 Gene

Genes around RPL23AP46 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP46 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP46 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP46 Gene

Proteins for RPL23AP46 Gene

Post-translational modifications for RPL23AP46 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP46 Gene

Domains & Families for RPL23AP46 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP46 Gene

Function for RPL23AP46 Gene

Phenotypes From GWAS Catalog for RPL23AP46 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL23AP46
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP46 Gene

Localization for RPL23AP46 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP46 Gene

Pathways & Interactions for RPL23AP46 Gene

SuperPathways for RPL23AP46 Gene

No Data Available

Interacting Proteins for RPL23AP46 Gene

Gene Ontology (GO) - Biological Process for RPL23AP46 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP46 Gene

Drugs & Compounds for RPL23AP46 Gene

No Compound Related Data Available

Transcripts for RPL23AP46 Gene

mRNA/cDNA for RPL23AP46 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL23AP46
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP46 Gene

No ASD Table

Relevant External Links for RPL23AP46 Gene

GeneLoc Exon Structure for
RPL23AP46
ECgene alternative splicing isoforms for
RPL23AP46

Expression for RPL23AP46 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP46 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP46 Gene:

RPL23AP46
genes like me logo Genes that share expression patterns with RPL23AP46: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP46 Gene

Orthologs for RPL23AP46 Gene

Evolution for RPL23AP46 Gene

ENSEMBL:
Gene Tree for RPL23AP46 (if available)
TreeFam:
Gene Tree for RPL23AP46 (if available)

No data available for Orthologs for RPL23AP46 Gene

Paralogs for RPL23AP46 Gene

No data available for Paralogs for RPL23AP46 Gene

Variants for RPL23AP46 Gene

Relevant External Links for RPL23AP46 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP46

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP46 Gene

Disorders for RPL23AP46 Gene

Relevant External Links for RPL23AP46

Genetic Association Database (GAD)
RPL23AP46

No disorders were found for RPL23AP46 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL23AP46 Gene

Publications for RPL23AP46 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Chromosome 6p22 locus associated with clinically aggressive neuroblastoma. (PMID: 18463370) Maris JM … Hakonarson H (The New England journal of medicine 2008) 45 60

Products for RPL23AP46 Gene

Sources for RPL23AP46 Gene

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