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Aliases for RPL23AP40 Gene

Subcategory (RNA class) for RPL23AP40 Gene


Aliases for RPL23AP40 Gene

  • Ribosomal Protein L23a Pseudogene 40 2 3 5
  • RPL23A_17_408 3

External Ids for RPL23AP40 Gene

ORGUL Members for RPL23AP40 Gene

Previous GeneCards Identifiers for RPL23AP40 Gene

  • GC03U901193
  • GC03P138516

Summaries for RPL23AP40 Gene

GeneCards Summary for RPL23AP40 Gene

RPL23AP40 (Ribosomal Protein L23a Pseudogene 40) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL23AP40 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP40 Gene

Genomics for RPL23AP40 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP40 Gene

Promoters and enhancers for RPL23AP40 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I138796 Enhancer 0.3 dbSUPER 550.8 +0.2 188 1 RUNX3 RPL23AP40 EEF1A1P25 GC03M138772 PIK3CB
GH03I138786 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -9.6 -9625 1.8 ELF3 SOX13 GATAD2A TEAD1 CEBPB MAX CEBPG FEZF1 SKI PRDM6 PIK3CB CEP70 FAIM RPL23AP40 GAPDHP39 GC03M138772
GH03I138823 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +27.3 27332 2.2 ATF1 PKNOX1 FOXA2 ARID4B SIN3A DMAP1 BRCA1 ETS1 YY1 TCF12 EEF1A1P25 GC03M138772 PIK3CB RPL23AP40
GH03I138780 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -15.7 -15721 0.9 IRF2 GATA3 GLIS1 FEZF1 ZBTB17 FAIM CEP70 GAPDHP39 RPL23AP40 GC03M138772 PIK3CB
GH03I138790 Enhancer 0.7 dbSUPER 0.4 -5.4 -5433 1.6 BATF IRF4 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 RXRA NR2F1 CBFB FAIM RPL23AP40 GAPDHP39 GC03M138772 PIK3CB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL23AP40 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP40 Gene

Genomic Locations for RPL23AP40 Gene
390 bases
Plus strand

Genomic View for RPL23AP40 Gene

Genes around RPL23AP40 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP40 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP40 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP40 Gene

Proteins for RPL23AP40 Gene

Post-translational modifications for RPL23AP40 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP40 Gene

Domains & Families for RPL23AP40 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP40 Gene

Function for RPL23AP40 Gene

Phenotypes From GWAS Catalog for RPL23AP40 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP40 Gene

Localization for RPL23AP40 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP40 Gene

Pathways & Interactions for RPL23AP40 Gene

SuperPathways for RPL23AP40 Gene

No Data Available

Interacting Proteins for RPL23AP40 Gene

Gene Ontology (GO) - Biological Process for RPL23AP40 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL23AP40 Gene

Drugs & Compounds for RPL23AP40 Gene

No Compound Related Data Available

Transcripts for RPL23AP40 Gene

mRNA/cDNA for RPL23AP40 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP40 Gene

No ASD Table

Relevant External Links for RPL23AP40 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL23AP40 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP40 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP40 Gene:

genes like me logo Genes that share expression patterns with RPL23AP40: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP40 Gene

Orthologs for RPL23AP40 Gene

Evolution for RPL23AP40 Gene

Gene Tree for RPL23AP40 (if available)
Gene Tree for RPL23AP40 (if available)

No data available for Orthologs for RPL23AP40 Gene

Paralogs for RPL23AP40 Gene

No data available for Paralogs for RPL23AP40 Gene

Variants for RPL23AP40 Gene

Additional Variant Information for RPL23AP40 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP40 Gene

Disorders for RPL23AP40 Gene

No disorders were found for RPL23AP40 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP40 Gene

Publications for RPL23AP40 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL23AP40 Gene

Sources for RPL23AP40 Gene

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