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Aliases for RPL23AP34 Gene

Subcategory (RNA class) for RPL23AP34 Gene

lncRNA

Aliases for RPL23AP34 Gene

  • Ribosomal Protein L23a Pseudogene 34 2 3 5
  • RPL23A_8_204 3

External Ids for RPL23AP34 Gene

ORGUL Members for RPL23AP34 Gene

Previous GeneCards Identifiers for RPL23AP34 Gene

  • GC02U901628
  • GC02P028532

Summaries for RPL23AP34 Gene

GeneCards Summary for RPL23AP34 Gene

RPL23AP34 (Ribosomal Protein L23a Pseudogene 34) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL23AP34 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP34 Gene

Genomics for RPL23AP34 Gene

Regulatory Elements for RPL23AP34 Gene

Enhancers for RPL23AP34 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H028273 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -32.5 -32514 3 PKNOX1 ATF1 GLIS2 FOS RUNX3 JUNB TSHZ1 ZNF518A MAFF SMARCA4 FOSL2 LOC100505716 RBKS LOC100505774 PPP1CB RPL23AP34 LOC100505736
GH02H028267 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -38.2 -38157 5 PKNOX1 ARNT FEZF1 BRCA1 TCF12 GATA2 FOS SP3 JUNB SMARCA4 FLJ31356 FOSL2 RPL23AP34 LOC100505736
GH02H028297 0.8 ENCODE dbSUPER 0.4 -11.0 -11033 0 JUND JUN CEBPB FOS RPL23AP34 LOC100505736
GH02H028296 0.8 FANTOM5 dbSUPER 0.4 -11.7 -11687 0 JUND FOS FOSL2 RBKS PPP1CB RPL23AP34 LOC100505736
GH02H028299 0.6 Ensembl ENCODE 0.4 -7.1 -7134 2 ZNF623 LOC100505716 RPL23AP34 LOC100505736
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL23AP34 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23AP34 Gene

Chromosome:
2
Start:
28,308,161 bp from pter
End:
28,308,570 bp from pter
Size:
410 bases
Orientation:
Plus strand

Genomic View for RPL23AP34 Gene

Genes around RPL23AP34 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP34 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP34 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP34 Gene

Proteins for RPL23AP34 Gene

Post-translational modifications for RPL23AP34 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP34 Gene

Domains & Families for RPL23AP34 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP34 Gene

Function for RPL23AP34 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL23AP34
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP34 Gene

Localization for RPL23AP34 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP34 Gene

Pathways & Interactions for RPL23AP34 Gene

SuperPathways for RPL23AP34 Gene

No Data Available

Interacting Proteins for RPL23AP34 Gene

Gene Ontology (GO) - Biological Process for RPL23AP34 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP34 Gene

Drugs & Compounds for RPL23AP34 Gene

No Compound Related Data Available

Transcripts for RPL23AP34 Gene

mRNA/cDNA for RPL23AP34 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL23AP34
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP34 Gene

No ASD Table

Relevant External Links for RPL23AP34 Gene

GeneLoc Exon Structure for
RPL23AP34
ECgene alternative splicing isoforms for
RPL23AP34

Expression for RPL23AP34 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP34 Gene

mRNA expression in normal human tissues for RPL23AP34 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP34 Gene:

RPL23AP34
genes like me logo Genes that share expression patterns with RPL23AP34: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP34 Gene

Orthologs for RPL23AP34 Gene

Evolution for RPL23AP34 Gene

ENSEMBL:
Gene Tree for RPL23AP34 (if available)
TreeFam:
Gene Tree for RPL23AP34 (if available)

No data available for Orthologs for RPL23AP34 Gene

Paralogs for RPL23AP34 Gene

No data available for Paralogs for RPL23AP34 Gene

Variants for RPL23AP34 Gene

Relevant External Links for RPL23AP34 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP34

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP34 Gene

Disorders for RPL23AP34 Gene

No disorders were found for RPL23AP34 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP34 Gene

Publications for RPL23AP34 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPL23AP34 Gene

Sources for RPL23AP34 Gene

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